Pre_GI: BLASTP Hits

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Query: NC_013508:26348:32473 Edwardsiella tarda EIB202, complete genome

Start: 32473, End: 32748, Length: 276

Host Lineage: Edwardsiella tarda; Edwardsiella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Edwardsiella tarda is a Gram-negative member of the normal gut microflora of fish, humans, chickens and other animals. This organism is also a serious pathogen of marine and freshwater fish and has been isolated from channel catfish, Japanese eels, flounder, tilapia, and other economically important fish. Infection by this organism is characterized by septicemia, internal abscesses, and skin lesions. This disease is often associated with poor water quality and mortality in aquaculture can be high. Edwardsiella tarda also causes opportunistic infections in humans, most commonly gastroenteritis and wound infections. However, this organism has been isolated from cases of septicemia and meningitis, primarily in immunocompromised patients.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004337:3590323:379242237924223792697276Shigella flexneri 2a str. 301, complete genomeDNA-directed RNA polymerase omega subunit6e-33139
NC_020260:4029951:404756340475634047838276Cronobacter sakazakii Sp291, complete genomeDNA-directed RNA polymerase subunit omega2e-32137
NC_009778:4014026:403162540316254031900276Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-32137
NC_009648:4359875:437883943788394379114276Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeDNA-directed RNA polymerase subunit omega2e-32137
NC_011094:3778000:381893838189383819213276Salmonella enterica subsp. enterica serovar Schwarzengrund strDNA-directed RNA polymerase subunit omega2e-32137
NC_011283:105245:105245105245105520276Klebsiella pneumoniae 342 chromosome, complete genomeDNA-directed RNA polymerase subunit omega2e-32137
NC_012731:5074000:509301950930195093294276Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeDNA-directed RNA polymerase subunit omega2e-32137
NC_016845:5162481:518149451814945181769276Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,DNA-directed RNA polymerase subunit omega2e-32137
NC_013716:4306695:439799943979994398274276Citrobacter rodentium ICC168, complete genomeDNA-directed RNA polymerase omega chain7e-32135
NC_010694:63654:657976579766072276Erwinia tasmaniensis, complete genomeDNA-directed RNA polymerase omega chain5e-32135
NC_013961:73037:751807518075455276Erwinia amylovora, complete genomeDNA-directed RNA polymerase omega chain5e-32135
NC_013971:73037:751807518075455276Erwinia amylovora ATCC 49946 chromosome, complete genomeDNA-directed RNA polymerase subunit omega5e-32135
NC_016816:127802:129931129931130206276Pantoea ananatis LMG 5342, complete genomeDNA-directed RNA polymerase subunit omega2e-30130
NC_013956:4326388:434453943445394344814276Pantoea ananatis LMG 20103 chromosome, complete genomeRpoZ2e-30130
NC_008800:36500:577415774158016276Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,DNA-directed RNA polymerase subunit omega6e-30129
NC_020064:4751097:477141747714174771692276Serratia marcescens FGI94, complete genomeDNA-directed RNA polymerase, omega subunit8e-30129
NC_009832:5369566:539112653911265391401276Serratia proteamaculans 568, complete genomeDNA-directed RNA polymerase, omega subunit1e-29128
NC_005126:274000:290628290628290918291Photorhabdus luminescens subsp. laumondii TTO1, complete genomeDNA-directed RNA polymerase omega subunit6e-29125
NC_008309:1628939:165109316510931651365273Haemophilus somnus 129PT, complete genomeDNA-directed RNA polymerase, omega chain4e-23106
NC_014366:354000:373619373619373861243Gamma proteobacterium HdN1, complete genomeDNA-directed RNA polymerase omega chain4e-1889.7
NC_007912:4661141:468121346812134681485273Saccharophagus degradans 2-40, complete genomeDNA-directed RNA polymerase, omega subunit1e-1684.7
NC_014532:3967463:398471239847123984990279Halomonas elongata DSM 2581, complete genomeDNA-directed RNA polymerase subunit omega3e-1580.5
NC_014752:617987:620224620224620430207Neisseria lactamica ST-640, complete genomeDNA-directed RNA polymerase omega chain5e-1166.6
NC_015722:4539:507750775448372Candidatus Midichloria mitochondrii IricVA chromosome, completeDNA-directed RNA polymerase subunit omega2e-0960.8
NC_009483:3727490:373295637329563733165210Geobacter uraniireducens Rf4 chromosome, complete genomeDNA-directed RNA polymerase subunit omega9e-0958.9
NC_007498:1491223:150726115072611507467207Pelobacter carbinolicus DSM 2380, complete genomeDNA-directed RNA polymerase, omega subunit1e-0858.9
NC_011979:2352961:237947523794752379684210Geobacter sp. FRC-32, complete genomeDNA-directed RNA polymerase, omega subunit2e-0858.2
NC_015381:992401:101896410189641019167204Burkholderia gladioli BSR3 chromosome 1, complete sequenceDNA-directed RNA polymerase subunit omega2e-0857.8
NC_007880:1456705:146332214633221463540219Francisella tularensis subsp. holarctica, complete genomeDNA-directed RNA polymerase omega subunit2e-0857.8
NC_009138:2110500:213021721302172130420204Herminiimonas arsenicoxydans, complete genomeDNA-directed RNA polymerase omega chain (RNAP omega subunit) (Transcriptase omega chain) (RNA polymerase omega subunit)4e-0856.6
NC_016937:707279:721959721959722177219Francisella tularensis subsp. tularensis TI0902 chromosome,DNA-directed RNA polymerase subunit omega5e-0856.2
NC_016933:783938:797866797866798084219Francisella tularensis TIGB03 chromosome, complete genomeDNA-directed RNA polymerase subunit omega5e-0856.2
NC_008601:631504:645826645826646044219Francisella tularensis subsp. novicida U112, complete genomeDNA-directed RNA polymerase, subunit K/omega5e-0856.2
NC_006570:707280:721960721960722178219Francisella tularensis subsp. tularensis Schu 4, complete genomeDNA-directed RNA polymerase omega subunit5e-0856.2
NC_008245:707984:721912721912722130219Francisella tularensis subsp. tularensis FSC 198, complete genomeDNA-directed RNA polymerase omega subunit5e-0856.2
NC_007517:2632233:263444326344432634652210Geobacter metallireducens GS-15, complete genomeRNA polymerase, omega subunit1e-0755.5
NC_015696:1749863:175984117598411760059219Francisella sp. TX077308 chromosome, complete genomeDNA-directed RNA polymerase subunit omega2e-0754.7
NC_010336:213148:240634240634240852219Francisella philomiragia subsp. philomiragia ATCC 25017, completeDNA-directed RNA polymerase, subunit K/omega2e-0754.7