Pre_GI: BLASTP Hits

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Query: NC_013199:392450:410950 Lactobacillus rhamnosus Lc 705, complete genome

Start: 410950, End: 411366, Length: 417

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015425:841754:863224863224863643420Clostridium botulinum BKT015925 chromosome, complete genomePTS system mannose/fructose/sorbose family transporter subunit IIA6e-0959.7
NC_015519:270637:289790289790290194405Tepidanaerobacter sp. Re1 chromosome, complete genomePTS system fructose subfamily transporter subunit IIA2e-0857.8
NC_009442:1158268:116773711677371168171435Streptococcus suis 05ZYH33 chromosome, complete genomephosphotransferase system, mannose/fructose-specific component IIA1e-0755.1
NC_008261:967973:969127969127970107981Clostridium perfringens ATCC 13124, complete genomePTS system, mannose/fructose/sorbose family, IIB component4e-0753.5
NC_009089:581655:581655581655582062408Clostridium difficile 630, complete genomePTS system, IIa component5e-0753.1
NC_014106:419511:4506944506944517011008Lactobacillus crispatus ST1, complete genomePTS system, mannose-specific IIAB component6e-0752.8
NC_018528:1681060:1689111168911116901211011Lactobacillus helveticus R0052 chromosome, complete genomePTS system mannost-specific transporter subunits IIAB1e-0652
NC_014724:439594:4752374752374762471011Lactobacillus amylovorus GRL 1112 chromosome, complete genomePTS system, mannose-specific IIAB component2e-0651.6
NC_013192:469771:485291485291486280990Leptotrichia buccalis DSM 1135, complete genomePTS system, mannose/fructose/sorbose family, IIA subunit2e-0651.6
NC_009617:4436837:445280944528094453231423Clostridium beijerinckii NCIMB 8052 chromosome, complete genomePTS system mannose/fructose/sorbose family transporter subunit IIA2e-0651.2
NC_010723:1379256:139787513978751398852978Clostridium botulinum E3 str. Alaska E43, complete genomePTS system, mannose/fructose/sorbose family, IIB component2e-0651.2
NC_013192:2434664:245430424543042454747444Leptotrichia buccalis DSM 1135, complete genomePTS system, mannose/fructose/sorbose family, IIA subunit3e-0650.4
NC_016612:2902628:292817629281762928607432Klebsiella oxytoca KCTC 1686 chromosome, complete genomePTS system mannose-specific transporter subunit IIAB3e-0650.4
NC_005139:518760:528045528045528485441Vibrio vulnificus YJ016 chromosome I, complete sequencephosphotransferase system, mannose/fructose-specific component IIA3e-0650.4