Pre_GI: BLASTP Hits

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Query: NC_013199:282901:295207 Lactobacillus rhamnosus Lc 705, complete genome

Start: 295207, End: 295956, Length: 750

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013198:298000:313175313175313924750Lactobacillus rhamnosus GG, complete genomemembrane spanning protein, DNA gyrase, A subunit4e-140497
NC_008526:250000:264946264946265722777Lactobacillus casei ATCC 334, complete genomehypothetical protein2e-123441
NC_010999:252605:264217264217264993777Lactobacillus casei, complete genomeLabL (Fragment)2e-123441
NC_014334:267409:281786281786282562777Lactobacillus casei str. Zhang chromosome, complete genomehypothetical protein2e-123441
NC_007576:299266:312955312955313728774Lactobacillus sakei subsp. sakei 23K, complete genomeHypothetical membrane protein5e-84310
NC_016641:3217201:323484632348463235601756Paenibacillus terrae HPL-003 chromosome, complete genomehypothetical protein2e-42172
NC_007350:2019623:203602220360222036783762Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305,hypothetical protein4e-41168
NC_021182:2360500:236116023611602361933774Clostridium pasteurianum BC1, complete genomehypothetical protein7e-31134
NC_008593:1060548:106054810605481061324777Clostridium novyi NT, complete genomemembrane spanning protein2e-29129
NC_014657:944000:964595964595965347753Caldicellulosiruptor owensensis OL chromosome, complete genomehypothetical protein4e-29128
NC_019978:1477724:149323114932311493974744Halobacteroides halobius DSM 5150, complete genomehypothetical protein8e-26117
NC_018664:1795223:179937817993781800151774Clostridium acidurici 9a chromosome, complete genomehypothetical protein DUF12122e-25115
NC_013316:3056925:307808330780833078871789Clostridium difficile R20291, complete genomehypothetical protein2e-21102
NC_009089:3142976:316430931643093165097789Clostridium difficile 630, complete genomehypothetical protein2e-21102
NC_012658:545840:552521552521553279759Clostridium botulinum Ba4 str. 657 chromosome, complete genomehypothetical protein3e-21102
NC_013171:636293:641478641478642263786Anaerococcus prevotii DSM 20548, complete genomeprotein of unknown function DUF12124e-21101
NC_010337:2950500:2950758295075829520501293Heliobacterium modesticaldum Ice1, complete genomehypothetical protein1e-20100
NC_014376:869749:871773871773872552780Clostridium saccharolyticum WM1 chromosome, complete genomeprotein of unknown function DUF12124e-1995.1
NC_010376:1175916:118853811885381189293756Finegoldia magna ATCC 29328, complete genomehypothetical protein6e-1684.3
NC_009614:769851:7743947743947757401347Bacteroides vulgatus ATCC 8482 chromosome, complete genomeintegral membrane protein2e-0962.8