Pre_GI: BLASTP Hits

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Query: NC_013198:394000:428574 Lactobacillus rhamnosus GG, complete genome

Start: 428574, End: 429803, Length: 1230

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006322:717953:7288637288637300891227Bacillus licheniformis ATCC 14580, complete genomephosphopentomutase2e-88326
NC_006270:718169:7290807290807303061227Bacillus licheniformis ATCC 14580, complete genomephosphopentomutase2e-88326
NC_015589:3085442:3103458310345831046391182Desulfotomaculum ruminis DSM 2154 chromosome, complete genomephosphopentomutase7e-28125
NC_011297:1296968:1298275129827512994531179Dictyoglomus thermophilum H-6-12, complete genomephosphopentomutase2e-27124
NC_019897:2004050:2024131202413120253091179Thermobacillus composti KWC4 chromosome, complete genomephosphopentomutase1e-26120
NC_020291:5093138:5108812510881251100021191Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomephosphopentomutase DeoB2e-26120
NC_015425:718384:7243327243327255371206Clostridium botulinum BKT015925 chromosome, complete genomephosphopentomutase1e-25117
NC_009454:1246393:1247396124739612485801185Pelotomaculum thermopropionicum SI, complete genomephosphopentomutase4e-25116
NC_020260:3277007:3300554330055433017771224Cronobacter sakazakii Sp291, complete genomephosphopentomutase7e-24112
NC_009617:3647500:3657550365755036587401191Clostridium beijerinckii NCIMB 8052 chromosome, complete genomephosphopentomutase7e-24112
NC_019970:2263427:2276961227696122781301170Thermoanaerobacterium thermosaccharolyticum M0795, complete genomephosphopentomutase9e-24111
NC_014618:4010689:4035599403559940368221224Enterobacter cloacae SCF1 chromosome, complete genomephosphopentomutase9e-23108
NC_013716:5141269:5168865516886551700881224Citrobacter rodentium ICC168, complete genomephosphopentomutase1e-22107
NC_015555:1989463:2005001200500120061701170Thermoanaerobacterium xylanolyticum LX-11 chromosome, completePhosphopentomutase3e-22106
NC_014220:481923:5004355004355016101176Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomephosphopentomutase7e-22105
NC_013956:3641368:3672081367208136733401260Pantoea ananatis LMG 20103 chromosome, complete genomeDeoB1e-21104
NC_017259:523840:5528555528555540781224Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,phosphopentomutase9e-21101
NC_015696:610000:6176556176556188991245Francisella sp. TX077308 chromosome, complete genomephosphopentomutase3e-20100
NC_017379:1233482:1234183123418312354241242Helicobacter pylori Puno135 chromosome, complete genomephosphopentomutase3e-2099.8
NC_014837:3633378:3660842366084236620651224Pantoea sp. At-9b chromosome, complete genomephosphopentomutase6e-2098.6
NC_017378:1175639:1176337117633711775781242Helicobacter pylori Puno120 chromosome, complete genomephosphopentomutase7e-2098.6
NC_013517:1916020:1927423192742319286011179Sebaldella termitidis ATCC 33386, complete genomephosphopentomutase9e-2098.2
NC_018607:2375344:2375962237596223771221161Brachyspira pilosicoli B2904 chromosome, complete genomephosphopentomutase2e-1997.4
NC_002942:675829:6771096771096783321224Legionella pneumophila subsp. pneumophila str. Philadelphia 1,phosphopentomutase1e-1687.8
NC_015433:1315363:1315719131571913169301212Streptococcus suis ST3 chromosome, complete genomephosphopentomutase2e-1687
NC_010999:2483000:2487653248765324888431191Lactobacillus casei, complete genomePhosphopentomutase (Phosphodeoxyribomutase)3e-1686.7
NC_013199:2386924:2394724239472423959141191Lactobacillus rhamnosus Lc 705, complete genomePhosphopentomutase (Phosphodeoxyribomutase)4e-1685.9
NC_014150:2617072:2617072261707226182291158Brachyspira murdochii DSM 12563 chromosome, complete genomephosphopentomutase1e-1584.7