Pre_GI: BLASTP Hits

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Query: NC_013198:298000:309117 Lactobacillus rhamnosus GG, complete genome

Start: 309117, End: 309515, Length: 399

Host Lineage: Lactobacillus rhamnosus; Lactobacillus; Lactobacillaceae; Lactobacillales; Firmicutes; Bacteria

General Information: They are commonly found in the oral, vaginal, and intestinal regions of many animals. They are important industrial microbes that contribute to the production of cheese, yogurt, and other products such as fermented milks, all stemming from the production of lactic acid, which inhibits the growth of other organisms as well as lowering the pH of the food product. Industrial production requires the use of starter cultures, which are carefully cultivated, created, and maintained, which produce specific end products during fermentation that impart flavor to the final product, as well as contributing important metabolic reactions, such as the breakdown of milk proteins during cheese production. The end product of fermentation, lactic acid, is also being used as a starter molecule for complex organic molecule syntheses. Lactobacillus rhamnosus is used in the manufacture of cheese and other dairy products to aid ripening and enhance flavors. This organism has also been shown to stimulate the immune system and have antibacterial activity against intestinal pathogens, indicating that it may be useful as a probiotic.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013199:282901:291143291143291541399Lactobacillus rhamnosus Lc 705, complete genomehypothetical protein2e-71266
NC_013198:813830:824610824610825008399Lactobacillus rhamnosus GG, complete genomehypothetical protein2e-71266
NC_013199:811929:819160819160819558399Lactobacillus rhamnosus Lc 705, complete genomehypothetical protein2e-71266
NC_013199:1886271:189552318955231895888366Lactobacillus rhamnosus Lc 705, complete genomehypothetical protein5e-47186
NC_013199:2536705:254819125481912548556366Lactobacillus rhamnosus Lc 705, complete genomehypothetical protein5e-47186
NC_013198:1921500:192924119292411929606366Lactobacillus rhamnosus GG, complete genomehypothetical protein5e-47186
NC_008526:250000:2595102595102610771568Lactobacillus casei ATCC 334, complete genome16S ribosomal RNA8e-34142
NC_010337:2339056:234581823458182346225408Heliobacterium modesticaldum Ice1, complete genomehypothetical protein1e-1891.7
NC_011144:1264871:1272412127241212738481437Phenylobacterium zucineum HLK1, complete genome16S ribosomal RNA8e-1062.4