Pre_GI: BLASTP Hits

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Query: NC_012917:569856:580765 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 580765, End: 580983, Length: 219

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012912:4012112:402043140204314020649219Dickeya zeae Ech1591, complete genomePost-segregation antitoxin CcdA1e-34144
NC_012880:3982383:399080939908093991027219Dickeya dadantii Ech703, complete genomePost-segregation antitoxin CcdA2e-34144
NC_012917:985617:995981995981996199219Pectobacterium carotovorum subsp. carotovorum PC1, complete genomePost-segregation antitoxin CcdA6e-34142
NC_012880:3529017:353578035357803535998219Dickeya dadantii Ech703, complete genomePost-segregation antitoxin CcdA2e-33141
NC_009790:42112:578135781358061249Escherichia coli E24377A plasmid pETEC_74, complete sequencepost-segregation antitoxin CcdA6e-22102
NC_007941:11319:505715057150789219Escherichia coli UTI89 plasmid pUTI89, complete sequenceplasmid maintenance protein CcdA8e-22102
NC_004547:1062410:107396610739661074184219Erwinia carotovora subsp. atroseptica SCRI1043, complete genometoxin addiction system:antidote1e-2098.2
NC_014500:842493:863257863257863496240Dickeya dadantii 3937 chromosome, complete genomeputative antitoxin of gyrase inhibiting toxin-antitoxin system4e-0856.6
NC_009832:1664238:169480016948001695036237Serratia proteamaculans 568, complete genomePost-segregation antitoxin CcdA1e-0755.1
NC_014500:3175283:318906831890683189304237Dickeya dadantii 3937 chromosome, complete genomeputative antitoxin of gyrase inhibiting toxin-antitoxin system7e-0752.8
NC_016831:4517850:452478145247814525020240Salmonella enterica subsp. enterica serovar Gallinarum/pullorumantitoxin protein (leta protein) (protein h) (lyna)1e-0652
NC_011294:4560902:456763345676334567872240Salmonella enterica subsp. enterica serovar Enteritidis strantitoxin protein1e-0652
NC_011205:4718239:472497047249704725209240Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein1e-0652
NC_011274:4538722:454542045454204545692273Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91antitoxin protein LetA1e-0652
NC_010102:4745949:474926747492674749506240Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-0652
NC_011149:4677412:467741246774124677651240Salmonella enterica subsp. enterica serovar Agona str. SL483,hypothetical protein1e-0652
NC_014500:3097362:316586731658673166103237Dickeya dadantii 3937 chromosome, complete genomeputative antitoxin of gyrase inhibiting toxin-antitoxin system6e-0649.7