Pre_GI: BLASTP Hits

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Query: NC_012917:1840172:1881570 Pectobacterium carotovorum subsp. carotovorum PC1, complete genome

Start: 1881570, End: 1881800, Length: 231

Host Lineage: Pectobacterium carotovorum; Pectobacterium; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Host. Pectobacterium carotovorum causes soft-rot diseases of various plant hosts through degradation of the plant cell walls. Formerly Erwinia, these organisms are plant-specific pathogens that invade the vascular systems of plants. Pectobacterium colonize the intercellular spaces of plant cells and deliver potent effector molecules (Avr - avirulence) through a type III secretion system (Hrp - hypersensitive response and pathogenicity). Avr proteins control host-bacterium interactions, including host range. Expression of the plant cell-wall-degrading enzymes is controlled through a quorum-sensing mechanism that quantifies the number of Pectobacterium bacteria through measurement of the concentration of small molecules (acyl homoserine lactones) produced by Pectobacterium.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015566:3622385:362586236258623626089228Serratia sp. AS12 chromosome, complete genomehypothetical protein1e-32138
NC_020064:3157656:316212431621243162351228Serratia marcescens FGI94, complete genomehypothetical protein6e-32135
NC_014618:1593360:160718116071811607408228Enterobacter cloacae SCF1 chromosome, complete genomehypothetical protein1e-29128
NC_010067:660659:678272678272678499228Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-27121
NC_012912:2800884:280205728020572802287231Dickeya zeae Ech1591, complete genomeprotein of unknown function DUF14145e-27119
NC_013961:2370994:237536123753612375588228Erwinia amylovora, complete genomeUPF0352 protein YPO1261/y2923/YP_08803e-26117
NC_013971:2408522:241288924128892413116228Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein3e-26117
NC_016816:1545354:157494915749491575173225Pantoea ananatis LMG 5342, complete genomehypothetical protein1e-25115
NC_011147:682897:702178702178702405228Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein1e-22104
NC_011094:2348491:234849123484912348718228Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein1e-22104
NC_003197:2327474:232866123286612328888228Salmonella typhimurium LT2, complete genomeputative cytoplasmic protein1e-22104
NC_006511:682863:702232702232702459228Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCChypothetical protein1e-22104
NC_010102:683444:716921716921717148228Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-22104
NC_004631:685357:709439709439709666228Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-22104
NC_011083:2375061:237624823762482376475228Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,hypothetical protein1e-22104
NC_012125:1517925:154181415418141542041228Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein1e-22104
NC_016810:2325190:232637723263772326604228Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-22104
NC_017046:2324554:232574123257412325968228Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein1e-22104
NC_016863:2324293:232840623284062328633228Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein1e-22104
NC_016860:2323017:232420423242042324431228Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein1e-22104
NC_016857:2325190:232637723263772326604228Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74protein yejL1e-22104
NC_016856:2379027:238021423802142380441228Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Shypothetical protein1e-22104
NC_016832:687000:709393709393709620228Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein1e-22104
NC_016831:687549:711330711330711557228Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-22104
NC_011852:211314:233054233054233278225Haemophilus parasuis SH0165, complete genomehypothetical protein1e-1478.6
NC_004603:2235142:223762422376242237851228Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehypothetical protein1e-1375.1
NC_011663:2123388:214232221423222142579258Shewanella baltica OS223 chromosome, complete genomehypothetical protein2e-1374.3
NC_014965:2200974:220206022020602202287228Vibrio vulnificus MO6-24/O chromosome I, complete sequencehypothetical protein3e-1373.9
NC_008322:2716676:271774327177432718000258Shewanella sp. MR-7, complete genomeprotein of unknown function DUF14141e-1271.6
NC_008321:2649781:264978126497812650038258Shewanella sp. MR-4, complete genomeprotein of unknown function DUF14141e-1271.6
NC_009092:1684467:169729216972921697570279Shewanella loihica PV-4, complete genomeprotein of unknown function DUF14144e-1166.6