Pre_GI: BLASTP Hits

Some Help

Query: NC_012791:5496175:5504045 Variovorax paradoxus S110 chromosome 1, complete genome

Start: 5504045, End: 5504554, Length: 510

Host Lineage: Variovorax paradoxus; Variovorax; Comamonadaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: Temp: Mesophile; Habitat: Soil. Variovorax paradoxus S110 is able to grow autotrophically using hydrogen gas and carbon dioxide for energy and carbon. Variovorax paradoxus is a nutritionally diverse organism which is commonly isolated from soil. Strains of this organism are able to degrade a number of compounds such as explosives and pesticides. Variovorax paradoxus is also a plant-growth promoting organism, increasing the resistance of the plant to disease and heavy metals.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014931:6415940:642444364244436424994552Variovorax paradoxus EPS chromosome, complete genomefimbrial protein pilin3e-58224
NC_015556:4118304:413193541319354132417483Pseudomonas fulva 12-X chromosome, complete genometype IV pilin2e-21101
NC_010002:5752363:576471057647105765156447Delftia acidovorans SPH-1, complete genomefimbrial protein pilin2e-1478.2
NC_015563:1595500:160220016022001602613414Delftia sp. Cs1-4 chromosome, complete genomefimbrial protein pilin6e-1476.6
NC_010002:5752363:575757957575795758010432Delftia acidovorans SPH-1, complete genomefimbrial protein pilin7e-1373.2
NC_008786:557314:571337571337571816480Verminephrobacter eiseniae EF01-2, complete genomefimbrial protein pilin7e-1373.2
NC_018012:2327376:234146423414642341865402Thiocystis violascens DSM 198 chromosome, complete genomeprepilin-type N-terminal cleavage/methylation domain-containing protein2e-1271.2
NC_015740:926920:931932931932932357426Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeTfp pilus assembly protein PilE-like protein2e-1168.2
NC_007645:6049340:605757360575736058007435Hahella chejuensis KCTC 2396, complete genomeTfp pilus assembly protein PilE3e-1167.8
NC_006834:3422985:343006334300633430518456Xanthomonas oryzae pv. oryzae KACC10331, complete genometype IV pilin4e-1167.4
NC_008786:4216152:422129842212984221792495Verminephrobacter eiseniae EF01-2, complete genomefimbrial protein pilin6e-1167
NC_008781:3056407:307037130703713070805435Polaromonas naphthalenivorans CJ2, complete genometype IV pilin PilE6e-1166.6
NC_009434:1068281:107330110733011073708408Pseudomonas stutzeri A1501, complete genometype 4 fimbrial biogenesis protein PilE7e-1166.6
NC_013446:1173377:117929211792921179732441Comamonas testosteroni CNB-2, complete genomefimbrial protein pilin7e-1166.6
NC_017267:2955946:296392029639202964375456Xanthomonas oryzae pv. oryzicola BLS256 chromosome, completetype IV pilin2e-1065.1
NC_008782:3361850:337399733739973374485489Acidovorax sp. JS42, complete genomefimbrial protein pilin3e-1064.7
NC_007508:3183631:320174532017453202152408Xanthomonas campestris pv. vesicatoria str. 85-10, complete genometype IV pilin PilE2e-1064.7
NC_009439:1075170:108109010810901081515426Pseudomonas mendocina ymp, complete genomeTfp pilus assembly protein PilE-like protein2e-1064.7
NC_010717:3564955:357193535719353572303369Xanthomonas oryzae pv. oryzae PXO99A, complete genometype IV pilin5e-1063.9
NC_011901:3363500:337174633717463372171426Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completetype IV pilin5e-1063.5
NC_007705:3429493:343657034365703436950381Xanthomonas oryzae pv. oryzae MAFF 311018, complete genometype IV pilin6e-1063.5
NC_018080:5192264:520590052059005206325426Pseudomonas aeruginosa DK2 chromosome, complete genometype 4 fimbrial biogenesis protein PilE7e-1063.2
NC_008463:5364428:537695653769565377381426Pseudomonas aeruginosa UCBPP-PA14, complete genometype 4 fimbrial biogenesis protein PilE7e-1063.2
NC_015563:1595500:160942316094231609848426Delftia sp. Cs1-4 chromosome, complete genomefimbrial protein pilin4e-0960.5
NC_008740:979830:991389991389991847459Marinobacter aquaeolei VT8, complete genomegeneral secretion pathway protein H7e-0959.7
NC_015856:4203301:421178042117804212208429Collimonas fungivorans Ter331 chromosome, complete genometype IV pilus biogenesis protein PilE1e-0858.9
NC_015410:1144272:114917611491761149637462Pseudomonas mendocina NK-01 chromosome, complete genomeTfp pilus assembly protein PilE-like protein2e-0858.2
NC_012856:737170:752352752352752786435Ralstonia pickettii 12D chromosome 1, complete genometype IV pilin5e-0857
NC_014924:936158:949117949117949545429Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomeputative type IV pilin pile protein6e-0856.6
NC_007086:1936505:195197519519751952343369Xanthomonas campestris pv. campestris str. 8004, complete genometype IV pilin8e-0856.6
NC_003902:2933121:295787629578762958244369Xanthomonas campestris pv. campestris str. ATCC 33913, completetype IV pilin8e-0856.6
NC_010682:701912:715869715869716303435Ralstonia pickettii 12J chromosome 1, complete sequencetype IV pilin8e-0856.2
NC_014153:436082:440661440661441137477Thiomonas intermedia K12 chromosome, complete genomePilE protein2e-0652.4
NC_003919:3113343:312130531213053121736432Xanthomonas axonopodis pv. citri str. 306, complete genomePilE protein3e-0651.2
NC_016147:2471451:247549124754912475901411Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeputative prepilin like protein4e-0650.8