Pre_GI: BLASTP Hits

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Query: NC_012668:83641:106939 Vibrio cholerae MJ-1236 chromosome 1, complete sequence

Start: 106939, End: 107835, Length: 897

Host Lineage: Vibrio cholerae; Vibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: Vibrio cholerae MJ-1236 is a toxigenic O1 El Tor Inaba strain from Matlab, Bangladesh, 1994 that represents the "Matlab variant" of El Tor. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. Vibrio cholerae can colonize the mucosal surface of the small intestines of humans where it will cause cholera, a severe and sudden onset diarrheal disease. One famous outbreak was traced to a contaminated well in London in 1854 by John Snow, and epidemics, which can occur with extreme rapidity, are often associated with conditions of poor sanitation. The disease has a high lethality if left untreated, and millions have died over the centuries. There have been seven major pandemics between 1817 and today. Six were attributed to the classical biotype, while the 7th, which started in 1961, is associated with the El Tor biotype.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015224:889536:902624902624903517894Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,chromosome replication initiation inhibitor protein8e-75280
NC_008253:334467:342718342718343605888Escherichia coli 536, complete genomeputative LysR-family transcriptional regulator1e-57223
NC_008740:1484531:151373115137311514603873Marinobacter aquaeolei VT8, complete genometranscriptional regulator, LysR family2e-48192
NC_010524:933191:943524943524944378855Leptothrix cholodnii SP-6, complete genometranscriptional regulator, LysR family4e-47188
NC_009937:4350132:435642343564234357316894Azorhizobium caulinodans ORS 571, complete genometranscriptional regulator6e-46184
NC_015563:4414854:443300544330054433910906Delftia sp. Cs1-4 chromosome, complete genometranscriptional regulator ArgP1e-44180
NC_015953:2603526:260352626035262604431906Streptomyces sp. SirexAA-E chromosome, complete genomeLysR family transcriptional regulator4e-44178
NC_009654:3980289:398028939802893981167879Marinomonas sp. MWYL1, complete genomeLysR family transcriptional regulator1e-41170
NC_007951:1971584:198313919831391984071933Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional regulator, LysR family2e-41169
NC_012917:2362725:238420523842052385104900Pectobacterium carotovorum subsp. carotovorum PC1, complete genometranscriptional regulator, ArgP, LysR family1e-39164
NC_009075:15017:431024310243995894Burkholderia pseudomallei 668 chromosome II, complete sequenceTranscriptional regulator1e-39163
NC_010623:72500:763497634977254906Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, LysR family4e-39161
NC_003902:3514000:351545935154593516376918Xanthomonas campestris pv. campestris str. ATCC 33913, completechromosome replication initiation inhibitor protein6e-39161
NC_015947:1290614:131205113120511312944894Burkholderia sp. JV3 chromosome, complete genomeLysR family transcriptional regulator ArgP1e-38160
NC_010943:1426885:145597214559721456868897Stenotrophomonas maltophilia K279a, complete genomeputative LysR family TRANSCRIPTIONAL REGULATORY PROTEIN2e-38159
NC_015136:2282488:228305222830522283975924Burkholderia sp. CCGE1001 chromosome 1, complete sequenceLysR family transcriptional regulator ArgP3e-37155
NC_010676:2793237:280280828028082803740933Burkholderia phytofirmans PsJN chromosome 2, complete sequencetranscriptional regulator, LysR family4e-37155
NC_015136:2282488:231933023193302320274945Burkholderia sp. CCGE1001 chromosome 1, complete sequenceLysR family transcriptional regulator ArgP6e-37154
NC_010524:1005355:100965410096541010589936Leptothrix cholodnii SP-6, complete genometranscriptional regulator, LysR family6e-35148
NC_012982:2415237:243643924364392437323885Hirschia baltica ATCC 49814, complete genometranscriptional regulator, ArgP, LysR family3e-34145
NC_014550:7560:177491774918633885Arthrobacter arilaitensis Re117, complete genomelysine export transcriptional regulatory protein LysG1e-32140
NC_009480:2580429:258042925804292581325897Clavibacter michiganensis subsp. michiganensis NCPPB 382, completeputative transcriptional regulator, LysR family1e-30133
NC_012803:2195808:223996322399632240838876Micrococcus luteus NCTC 2665, complete genometranscriptional regulator4e-30132
NC_014539:743523:758850758850759758909Burkholderia sp. CCGE1003 chromosome 1, complete sequenceLysR family transcriptional regulator2e-0859.7
NC_013421:1173051:119350311935031194384882Pectobacterium wasabiae WPP163, complete genometranscriptional regulator, LysR family5e-0858.9
NC_016514:1183356:118335611833561184267912Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YhjC5e-0858.9
NC_002695:301939:326524326524327426903Escherichia coli O157:H7 str. Sakai, complete genomeputative transcriptional regulator4e-0858.9
NC_002655:301940:326525326525327409885Escherichia coli O157:H7 EDL933, complete genomeputative LysR-like transcriptional regulator4e-0858.9
NC_011353:305820:330404330404331288885Escherichia coli O157:H7 str. EC4115 chromosome, complete genomeLysR substrate binding domain-containing protein4e-0858.9
NC_013008:306953:331716331716332600885Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeLysR family transcriptional regulator4e-0858.9
NC_012731:2261787:227311822731182274002885Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeLysR family transcriptional regulator2e-0757
NC_014307:3240430:324997232499723250898927Ralstonia solanacearum CFBP2957 chromosome, complete genometranscriptional regulator protein2e-0757
NC_011901:342777:345910345910346800891Thioalkalivibrio sulfidophilus HL-EbGr7 chromosome, completeMetR family transcriptional regulator2e-0757
NC_008825:1113060:111928911192891120185897Methylibium petroleiphilum PM1, complete genometranscriptional regulator, LysR family3e-0756.2
NC_015422:1:130181301813860843Alicycliphilus denitrificans K601 chromosome, complete genomeLysR family transcriptional regulator3e-0756.2
NC_009615:1469642:151261415126141513540927Parabacteroides distasonis ATCC 8503 chromosome, complete genomeredox-sensitive transcriptional activator OxyR3e-0756.2
NC_009667:1341000:135994713599471360798852Ochrobactrum anthropi ATCC 49188 chromosome 1, complete sequenceLysR family transcriptional regulator3e-0755.8
NC_009255:1105786:114008611400861141009924Burkholderia vietnamiensis G4 chromosome 2, complete sequenceLysR family transcriptional regulator4e-0755.8
NC_010805:575709:590489590489591412924Burkholderia multivorans ATCC 17616 chromosome 2, completeLysR family transcriptional regulator4e-0755.8
NC_010086:1816378:188389218838921884815924Burkholderia multivorans ATCC 17616 chromosome 2, completetranscriptional regulator, LysR family4e-0755.8
NC_007509:3668:449674496745872906Burkholderia sp. 383 chromosome 3, complete sequencetranscriptional regulator, LysR family4e-0755.8
NC_004605:741000:749250749250750158909Vibrio parahaemolyticus RIMD 2210633 chromosome II, completeputative transcriptional regulator, LysR family5e-0755.5
NC_008752:3684739:370478237047823705693912Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, LysR family4e-0755.5
NC_020063:3690308:373302537330253733897873Enterobacteriaceae bacterium strain FGI 57, complete genometranscriptional regulator4e-0755.5
NC_008322:373531:376102376102376998897Shewanella sp. MR-7, complete genometranscriptional regulator, LysR family7e-0755.1
NC_013515:550464:552082552082552978897Streptobacillus moniliformis DSM 12112, complete genometranscriptional regulator, LysR family1e-0653.9
NC_010002:4287439:431379643137964314698903Delftia acidovorans SPH-1, complete genometranscriptional regulator, LysR family2e-0653.5
NC_007963:2644930:265185826518582652814957Chromohalobacter salexigens DSM 3043, complete genometranscriptional regulator, LysR family2e-0653.5
NC_008601:1151653:116050711605071161382876Francisella tularensis subsp. novicida U112, complete genometranscriptional regulator, LysR family2e-0653.1
NC_020064:3998715:408849740884974089402906Serratia marcescens FGI94, complete genometranscriptional regulator2e-0653.1
NC_017075:4259460:426246242624624263397936Rubrivivax gelatinosus IL144, complete genomeLysR family transcriptional regulator3e-0652.8
NC_012660:4669500:468873846887384689601864Pseudomonas fluorescens SBW25 chromosome, complete genomeputative LysR family transcriptional regulator3e-0652.8
NC_008497:2038612:205063220506322051540909Lactobacillus brevis ATCC 367, complete genomeTranscriptional regulator5e-0652
NC_014718:791528:798917798917799834918Burkholderia rhizoxinica HKI 454 chromosome, complete genomeTranscriptional regulators, LysR family5e-0652
NC_008819:199760:203273203273204223951Prochlorococcus marinus str. NATL1A, complete genomeputative Rubisco transcriptional regulator5e-0652
NC_007335:1474455:147796814779681478918951Prochlorococcus marinus str. NATL2A, complete genomeRuBisCO operon transcriptional regulator5e-0652
NC_015424:2836920:283692028369202837774855Aeromonas veronii B565 chromosome, complete genomeLysR family transcriptional regulator8e-0651.2
NC_004578:4708220:471062747106274711544918Pseudomonas syringae pv. tomato str. DC3000, complete genometranscriptional activator MetR9e-0651.2
NC_014727:95875:966349663497560927Lactobacillus delbrueckii subsp. bulgaricus ND02 chromosome,transcriptional regulator9e-0651.2