Pre_GI: BLASTP Hits

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Query: NC_012660:2431803:2445167 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 2445167, End: 2445844, Length: 678

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015580:293803:336293336293336946654Novosphingobium sp. PP1Y, complete genometranscriptional regulator(cAMP-binding)3e-28125
NC_008711:3701635:370163537016353702312678Arthrobacter aurescens TC1, complete genomeputative cyclic nucleotide-binding domain3e-1788.6
NC_015957:10403997:104039971040399710404671675Streptomyces violaceusniger Tu 4113 chromosome, complete genomeCrp/Fnr family transcriptional regulator2e-1685.5
NC_013510:5499447:550096255009625501648687Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, Crp/Fnr family3e-1685.1
NC_002927:2636694:263669426366942637515822Bordetella bronchiseptica RB50, complete genomeputative transcriptional regulator4e-1685.1
NC_008314:1559102:156908415690841569770687Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator CRP family1e-1583.2
NC_020126:5470090:549252754925275493210684Myxococcus stipitatus DSM 14675, complete genomeCrp/Fnr family transcriptional regulator1e-1479.7
NC_007759:2179000:219376221937622194511750Syntrophus aciditrophicus SB, complete genomecAMP-dependent transcriptional regulator2e-1479.3
NC_012917:4328463:433427643342764334908633Pectobacterium carotovorum subsp. carotovorum PC1, complete genometranscriptional regulator, Crp/Fnr family3e-1479
NC_011296:1821244:183697218369721837646675Thermodesulfovibrio yellowstonii DSM 11347, complete genomecatabolite gene activator2e-1479
NC_015588:2939747:294064829406482941325678Isoptericola variabilis 225 chromosome, complete genometranscriptional regulator, Crp/Fnr family4e-1478.2
NC_020409:437781:497477497477498151675Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeTranscriptional regulator, Crp/Fnr family1e-1273.2
NC_013530:3365742:336760333676033368280678Xylanimonas cellulosilytica DSM 15894, complete genometranscriptional regulator, Crp/Fnr family1e-1273.2
NC_000911:3478000:348256834825683483284717Synechocystis sp. PCC 6803, complete genomeDNR protein2e-1272.8
NC_017039:3474500:347921234792123479928717Synechocystis sp. PCC 6803 substr. PCC-P, complete genometranscriptional regulator DNR2e-1272.8
NC_017052:3474500:347920134792013479917717Synechocystis sp. PCC 6803 substr. PCC-N, complete genometranscriptional regulator DNR2e-1272.8
NC_017277:3475500:348020134802013480917717Synechocystis sp. PCC 6803, complete genometranscriptional regulator DNR2e-1272.8
NC_012913:2189862:218986221898622190506645Aggregatibacter aphrophilus NJ8700, complete genomecyclic nucleotide-binding domain protein2e-1272.4
NC_015589:814530:835693835693836349657Desulfotomaculum ruminis DSM 2154 chromosome, complete genomecyclic nucleotide-binding protein3e-1272
NC_014931:5470242:547778354777835478610828Variovorax paradoxus EPS chromosome, complete genometranscriptional regulator, Crp/Fnr family3e-1272
NC_016513:689689:706025706025706669645Aggregatibacter actinomycetemcomitans ANH9381 chromosome, completecAMP-regulatory protein5e-1271.2
NC_013416:386301:402632402632403276645Aggregatibacter actinomycetemcomitans D11S-1, complete genomecyclic nucleotide-binding domain protein5e-1271.2
NC_011899:1926000:193808619380861938745660Halothermothrix orenii H 168, complete genomeputative transcriptional regulator, Crp/Fnr family6e-1270.9
NC_012982:1597697:160949416094941610198705Hirschia baltica ATCC 49814, complete genometranscriptional regulator, Crp/Fnr family9e-1270.5
NC_009380:1885024:189212618921261892797672Salinispora tropica CNB-440 chromosome, complete genomecyclic nucleotide-binding protein1e-1170.1
NC_009922:2556033:255710525571052557773669Alkaliphilus oremlandii OhILAs, complete genomecyclic nucleotide-binding protein2e-1169.3
NC_015681:102000:116429116429117118690Thermodesulfatator indicus DSM 15286 chromosome, complete genomeCrp/Fnr family transcriptional regulator2e-1169.3
NC_011983:1746000:175180917518091752501693Agrobacterium radiobacter K84 chromosome 2, complete genomecyclic nucleotide-binding protein4e-1168.2
NC_015499:1640500:164275216427521643495744Thermodesulfobium narugense DSM 14796 chromosome, complete genometranscriptional regulator, Crp/Fnr family9e-1167
NC_011830:3369282:337608233760823376753672Desulfitobacterium hafniense DCB-2, complete genometranscriptional regulator, Crp/Fnr family2e-1065.9
NC_012918:2850755:285603528560352856751717Geobacter sp. M21 chromosome, complete genomeCrp/Fnr family transcriptional regulator4e-1065.1
NC_015565:2027279:207093620709362071604669Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completeCrp/Fnr family transcriptional regulator4e-1064.7
NC_015563:4206112:422387542238754224594720Delftia sp. Cs1-4 chromosome, complete genomeputative Crp/Fnr family transcriptional regulator5e-1064.7
NC_009380:3734773:375096037509603751652693Salinispora tropica CNB-440 chromosome, complete genomeCRP/FNR family transcriptional regulator6e-1064.3
NC_017075:2293209:229320922932092294000792Rubrivivax gelatinosus IL144, complete genomeCarD family transcriptional regulator1e-0963.5
NC_014973:1992694:202097520209752021700726Geobacter sp. M18 chromosome, complete genomeCrp/Fnr family transcriptional regulator1e-0963.5
NC_016641:4011000:402641540264154027101687Paenibacillus terrae HPL-003 chromosome, complete genomeCrp/Fnr family transcriptional regulator2e-0962.8
NC_012440:1405879:141651514165151417198684Persephonella marina EX-H1, complete genometranscriptional regulator2e-0962.4
NC_013406:2866000:291198929119892912690702Paenibacillus sp. Y412MC10 chromosome, complete genomeCrp/Fnr family transcriptional regulator5e-0961.2
NC_010610:1649500:166446916644691665119651Lactobacillus fermentum IFO 3956, complete genometranscriptional regulator5e-0961.2
NC_013947:1296877:130631313063131307020708Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, Crp/Fnr family8e-0960.5
NC_010424:1563033:156751815675181568225708Candidatus Desulforudis audaxviator MP104C, complete genomeputative transcriptional regulator, Crp/Fnr family9e-0960.5
NC_016584:85543:9958299582100250669Desulfosporosinus orientis DSM 765 chromosome, complete genomecAMP-binding protein1e-0860.1
NC_007516:2277910:232100323210032321698696Synechococcus sp. CC9605, complete genometranscriptional regulator, Crp/Fnr family1e-0860.1
NC_008752:4747376:476843647684364769233798Acidovorax avenae subsp. citrulli AAC00-1, complete genometranscriptional regulator, Crp/Fnr family1e-0860.1
NC_008609:2643000:264311826431182643834717Pelobacter propionicus DSM 2379, complete genometranscriptional regulator, Crp/Fnr family2e-0859.7
NC_014815:3790050:379748037974803798316837Micromonospora sp. L5 chromosome, complete genometranscriptional regulator, crp/fnr family6e-0857.8
NC_014209:2257316:228113822811382281815678Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,transcriptional regulator, Crp/Fnr family6e-0857.8
NC_008278:1876435:189724418972441897918675Frankia alni ACN14a, complete genomeputative transcriptional regulator with cyclic nucleotide-binding domain (CrP/Fnr-family)1e-0756.6
NC_016593:868500:884318884318885004687Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeanaerobic regulatory protein2e-0756.2
NC_016884:813000:815595815595816245651Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeCarD family transcriptional regulator2e-0756.2
NC_015757:2844599:286202028620202862670651Sulfobacillus acidophilus TPY chromosome, complete genomeCRP/FNR family transcriptional regulator2e-0756.2
NC_008593:1917118:193271019327101933390681Clostridium novyi NT, complete genometranscriptional regulator, Crp/Fnr family( include cyclic nucleotide-binding domain)3e-0755.5
NC_014964:2301835:231894623189462319623678Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completecyclic nucleotide-binding protein3e-0755.5
NC_010321:2319820:233693123369312337608678Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeCrp/FNR family transcriptional regulator3e-0755.5
NC_014960:1697818:170794217079421708643702Anaerolinea thermophila UNI-1, complete genomeCrp family transcriptional regulator3e-0755.5
NC_010510:409469:422448422448423218771Methylobacterium radiotolerans JCM 2831 plasmid pMRAD01, completetranscriptional regulator, Crp/Fnr family4e-0755.1
NC_016582:10104458:101119501011195010112456507Streptomyces bingchenggensis BCW-1 chromosome, complete genomeCrp family transcriptional regulator5e-0754.7
NC_019673:7400817:740786074078607408573714Saccharothrix espanaensis DSM 44229 complete genomeTranscriptional regulator, Crp/Fnr family6e-0754.3
NC_007776:2731981:274077127407712741424654Synechococcus sp. JA-2-3B'a(2-13), complete genometranscriptional regulator, Crp/Fnr family8e-0753.9
NC_012988:4075429:407808040780804078844765Methylobacterium extorquens DM4, complete genomeCrp/Fnr family transcriptional regulator9e-0753.9
NC_008528:331260:344323344323344988666Oenococcus oeni PSU-1, complete genomeCrp-like transcriptional regulator1e-0653.5
NC_010172:3712000:371216437121643712928765Methylobacterium extorquens PA1, complete genomecyclic nucleotide-binding1e-0653.1
NC_007951:570500:602624602624603352729Burkholderia xenovorans LB400 chromosome 1, complete sequenceTranscriptional regulator, Crp/Fnr family2e-0652.8
NC_017516:364404:384318384318385052735Neisseria meningitidis H44/76 chromosome, complete genomeCarD family transcriptional regulator3e-0652
NC_003112:364869:383368383368384102735Neisseria meningitidis MC58, complete genometranscriptional regulator, Crp/Fnr family3e-0652
NC_002936:285527:286986286986287729744Dehalococcoides ethenogenes 195, complete genometranscriptional regulator, Crp/Fnr family3e-0652
NC_010337:1999405:2015888201588820175731686Heliobacterium modesticaldum Ice1, complete genomecyclic nucleotide-binding transcriptional regulator, putative3e-0652
NC_014206:2912945:293092529309252931617693Geobacillus sp. C56-T3 chromosome, complete genomeCrp/Fnr family transcriptional regulator4e-0651.6
NC_015436:474710:498940498940499809870Spirochaeta coccoides DSM 17374 chromosome, complete genometranscriptional regulator, Crp/Fnr family5e-0651.2
NC_011884:315839:3384523384523398701419Cyanothece sp. PCC 7425, complete genomeMscS Mechanosensitive ion channel6e-0651.2
NC_014834:872924:872924872924873628705Rhodopseudomonas palustris DX-1 chromosome, complete genomeCrp/Fnr family transcriptional regulator1e-0550.4
NC_012856:1:204372043721135699Ralstonia pickettii 12D chromosome 1, complete genometranscriptional regulator, Crp/Fnr family1e-0550.4