Pre_GI: BLASTP Hits

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Query: NC_012660:2143376:2189369 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 2189369, End: 2189986, Length: 618

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015567:2125415:214741321474132148036624Serratia sp. AS9 chromosome, complete genomelysine exporter protein LysE/YggA3e-49194
NC_015566:2125403:214740121474012148024624Serratia sp. AS12 chromosome, complete genomelysine exporter protein LysE/YggA3e-49194
NC_016629:3789554:382537338253733826008636Desulfovibrio africanus str. Walvis Bay chromosome, completelysine exporter protein LysE/YggA3e-1478.6
NC_016002:3813039:381394238139423814574633Pseudogulbenkiania sp. NH8B, complete genomelysine exporter protein LysE/YggA4e-1374.3
NC_016944:168530:197140197140197808669Vibrio cholerae IEC224 chromosome I, complete sequencehypothetical protein5e-1271.2
NC_016445:2593800:262239826223982623066669Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehypothetical protein5e-1271.2
NC_002505:168532:197130197130197798669Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehypothetical protein5e-1271.2
NC_013456:1819421:182398218239821824617636Vibrio sp. Ex25 chromosome 1, complete genomethreonine efflux protein1e-1170.1
NC_016582:5769080:578622457862245786847624Streptomyces bingchenggensis BCW-1 chromosome, complete genomeLysine exporter protein LysE8e-1167
NC_009092:1684467:168446716844671685117651Shewanella loihica PV-4, complete genomeLysine exporter protein (LYSE/YGGA)1e-0963.5
NC_014838:218000:220948220948221580633Pantoea sp. At-9b plasmid pPAT9B01, complete sequencelysine exporter protein LysE/YggA1e-0860.1
NC_015566:3417951:344336534433653443997633Serratia sp. AS12 chromosome, complete genomelysine exporter protein LysE/YggA2e-0859.3
NC_015410:2505168:251246825124682513082615Pseudomonas mendocina NK-01 chromosome, complete genomelysine exporter protein LysE/YggA3e-0858.5
NC_020210:2969862:297178829717882972420633Geobacillus sp. GHH01, complete genomeputative transporter5e-0857.8
NC_009468:38112:538855388554379495Acidiphilium cryptum JF-5 plasmid pACRY02, complete sequencehypothetical protein9e-0857
NC_015061:2927707:293701329370132937630618Rahnella sp. Y9602 chromosome, complete genomelysine exporter protein (LYSE/YGGA)8e-0857
NC_017047:2957957:296726329672632967880618Rahnella aquatilis HX2 chromosome, complete genomelysine exporter protein LysE/YggA8e-0857
NC_009328:2905000:290504229050422905710669Geobacillus thermodenitrificans NG80-2 chromosome, complete genomehomoserine/homoserine lactone efflux protein8e-0857
NC_015740:4508375:452405345240534524664612Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completeamino acid transporter LysE2e-0756.2
NC_006677:1431500:145559014555901456222633Gluconobacter oxydans 621H, complete genomeAmino acid efflux protein2e-0755.8
NC_006138:2630338:263066726306672631317651Desulfotalea psychrophila LSv54, complete genomehypothetical protein2e-0755.8
NC_010322:4623867:462621246262124626829618Pseudomonas putida GB-1 chromosome, complete genomelysine exporter protein LysE/YggA4e-0754.7
NC_018750:3249756:326965532696553270272618Streptomyces venezuelae ATCC 10712, complete genomeL-lysine permease4e-0754.7
NC_014364:3238374:323837432383743239072699Spirochaeta smaragdinae DSM 11293 chromosome, complete genomeLysine exporter protein (LYSE/YGGA)4e-0754.7
NC_010170:1417615:143407414340741434691618Bordetella petrii, complete genomeputative amino acid efflux transmembrane protein5e-0754.3
NC_014100:533322:560868560868561494627Caulobacter segnis ATCC 21756 chromosome, complete genomelysing exporter protein1e-0652.8
NC_018868:4174794:417564341756434176308666Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomelysine exporter protein LysE/YggA1e-0652.8
NC_017986:4124335:414734041473404148038699Pseudomonas putida ND6 chromosome, complete genomeamino acid transporter LysE4e-0651.6
NC_007498:1072112:108687910868791087496618Pelobacter carbinolicus DSM 2380, complete genomeputative threonine efflux protein6e-0650.8