Pre_GI: BLASTP Hits

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Query: NC_012660:2045398:2065341 Pseudomonas fluorescens SBW25 chromosome, complete genome

Start: 2065341, End: 2066630, Length: 1290

Host Lineage: Pseudomonas fluorescens; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Isolated in 1989 from the leaf surface of a sugar beet plant grown at the University Farm, Wytham, Oxford, UK. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is a nonpathogenic saprophyte which inhabits soil, water and plant surface environments. If iron is in low supply, it produces a soluble, greenish fluorescent pigment, which is how it was named. As these environmentally versatile bacteria possess the ability to degrade (at least partially) multiple different pollutants, they are studied in their use as bioremediants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012856:2266187:226783622678362268459624Ralstonia pickettii 12D chromosome 1, complete genomecytochrome C oxidase mono-heme subunit/FixO3e-23109
NC_009092:2282437:229920022992002299805606Shewanella loihica PV-4, complete genomecytochrome c oxidase, cbb3-type, subunit II5e-23109
NC_012560:1965251:198681519868151987423609Azotobacter vinelandii DJ, complete genomecytochrome c oxidase, cbb3-type, subunit II6e-23108
NC_021150:1965264:198682819868281987436609Azotobacter vinelandii CA6, complete genomecytochrome c oxidase, cbb3-type, subunit II6e-23108
NC_007492:2035761:203883820388382039446609Pseudomonas fluorescens PfO-1, complete genomeCytochrome C oxidase, mono-heme subunit/FixO1e-22108
NC_012848:320883:341894341894342628735Rhizobium leguminosarum bv. trifolii WSM1325 plasmid pR132501,cytochrome c oxidase, cbb3-type, subunit II1e-22107
NC_010118:133256:1469581469581491682211Candidatus Sulcia muelleri GWSS, complete genomebifunctional cytochrome c oxidase subunits ccoN/O4e-22106
NC_009379:435404:447437447437448087651Polynucleobacter sp. QLW-P1DMWA-1, complete genomecytochrome c oxidase, cbb3-type, subunit II3e-22106
NC_012440:373863:375269375269376000732Persephonella marina EX-H1, complete genomecytochrome c oxidase, Cbb3-type, subunit II1e-21104
NC_016745:2229271:223341822334182234026609Oceanimonas sp. GK1 chromosome, complete genomecbb3-type cytochrome c oxidase subunit II5e-21102
NC_014541:2122788:213714321371432137754612Ferrimonas balearica DSM 9799 chromosome, complete genomecytochrome c oxidase, cbb3-type, subunit II6e-21102
NC_013422:2004478:201479020147902015521732Halothiobacillus neapolitanus c2, complete genomecytochrome c oxidase, cbb3-type, subunit II8e-21102
NC_011146:1429836:143171814317181432578861Geobacter bemidjiensis Bem, complete genomecytochrome c oxidase, cbb3-type, subunit II9e-21101
NC_008095:6877388:6889429688942968918102382Myxococcus xanthus DK 1622, complete genomecytochrome c oxidase, cbb3-type, subunit I/II5e-2099.4
NC_011992:1038985:104360910436091044241633Acidovorax ebreus TPSY, complete genomecytochrome c oxidase, cbb3-type, subunit II5e-2099.4
NC_008782:1136732:114135311413531141985633Acidovorax sp. JS42, complete genomecytochrome c oxidase, cbb3-type, subunit II5e-2099.4
NC_006513:1695487:171785717178571718462606Azoarcus sp. EbN1, complete genomecytochrome oxidase, cytochrome c subunit9e-2098.2
NC_009052:2512373:254857625485762549202627Shewanella baltica OS155, complete genomecytochrome c oxidase, cbb3-type, subunit II1e-1998.2
NC_014934:2223822:2223822222382222260202199Cellulophaga algicola DSM 14237 chromosome, complete genomecytochrome c oxidase, cbb3-type, subunit i1e-1997.8
NC_015422:1163752:117188711718871172519633Alicycliphilus denitrificans K601 chromosome, complete genomecytochrome c oxidase, cbb3-type subunit II2e-1997.4
NC_014910:3458475:347183434718343472466633Alicycliphilus denitrificans BC chromosome, complete genomecytochrome c oxidase, cbb3-type, subunit ii2e-1997.4
NC_008702:1432952:146203614620361462671636Azoarcus sp. BH72, complete genomeprobable cytochrome c oxidase, cbb3-type,subunit II2e-1997.1
NC_014166:3072703:308225730822573082940684Arcobacter nitrofigilis DSM 7299 chromosome, complete genomecbb3-type cytochrome c oxidase subunit II3e-1996.7
NC_020541:1827689:184740418474041848036633Rhodanobacter sp. 2APBS1, complete genomeCbb3-type cytochrome oxidase, cytochrome c subunit1e-1894.7
NC_005773:3851433:386749938674993868107609Pseudomonas syringae pv. phaseolicola 1448A, complete genomecytochrome c oxidase, cbb3-type, subunit II1e-1894.7
NC_020126:7896447:7918373791837379207332361Myxococcus stipitatus DSM 14675, complete genomebifunctional cbb3-type cytochrome c oxidase subunit I/II2e-1894.4
NC_004578:2185907:218590721859072186515609Pseudomonas syringae pv. tomato str. DC3000, complete genomecytochrome c oxidase, cbb3-type, subunit II2e-1893.6
NC_007005:4062311:407938740793874079995609Pseudomonas syringae pv. syringae B728a, complete genomeCytochrome C oxidase, mono-heme subunit/FixO3e-1893.6
NC_009714:1329573:133220013322001332868669Campylobacter hominis ATCC BAA-381, complete genomecbb3-type cytochrome c oxidase subunit II3e-1893.2
NC_009465:29735:412314123141962732Candidatus Vesicomyosocius okutanii HA, complete genomecbb3-type cytochrome c oxidase subunit II1e-1791.3
NC_007298:778723:785031785031785666636Dechloromonas aromatica RCB, complete genomeCytochrome C oxidase, mono-heme subunit/FixO2e-1790.5
NC_015458:1938860:193886019388601939501642Pusillimonas sp. T7-7 chromosome, complete genomecytochrome C oxidase, mono-heme subunit/FixO5e-1789.4
NC_012483:996555:1034387103438710363121926Acidobacterium capsulatum ATCC 51196, complete genomecytochrome C family protein4e-1686.3
NC_013960:1808523:1811989181198918139501962Nitrosococcus halophilus Nc4 chromosome, complete genomeiron permease FTR12e-1377.4
NC_014355:3248386:3259351325935132611351785Candidatus Nitrospira defluvii, complete genomeputative cytochrome c3e-1273.6
NC_018697:1343756:1381008138100813829691962Cycloclasticus sp. P1 chromosome, complete genomeIron permease FTR1/Cytochrome c domain protein4e-1272.8
NC_021150:1965264:198571919857191986639921Azotobacter vinelandii CA6, complete genomecytochrome c oxidase, cbb3-type, subunit III9e-1168.6
NC_012560:1965251:198570619857061986626921Azotobacter vinelandii DJ, complete genomecytochrome c oxidase, cbb3-type, subunit III9e-1168.6
NC_015671:1540860:155473015547301555515786Cellvibrio gilvus ATCC 13127 chromosome, complete genomecytochrome c class I6e-1065.9
NC_009138:1583988:1584965158496515869111947Herminiimonas arsenicoxydans, complete genomeputative cytochrome c, class I: iron permease FTR15e-1065.9
NC_010524:4644587:464458746445874645549963Leptothrix cholodnii SP-6, complete genomecytochrome c class I8e-1065.5
NC_008782:1308007:1317323131732313192571935Acidovorax sp. JS42, complete genomeiron permease FTR11e-0964.3
NC_009092:2282437:229998822999882300959972Shewanella loihica PV-4, complete genomecytochrome c oxidase, cbb3-type, subunit III2e-0964.3
NC_015514:2414617:242279424227942423579786Cellulomonas fimi ATCC 484 chromosome, complete genomecytochrome c class I2e-0963.9
NC_016745:2229271:223221722322172233194978Oceanimonas sp. GK1 chromosome, complete genomecytochrome c oxidase, cbb3-type subunit III3e-0963.5
NC_014151:2312000:231862023186202319405786Cellulomonas flavigena DSM 20109 chromosome, complete genomecytochrome c class I9e-0962
NC_009052:2512373:254939025493902550358969Shewanella baltica OS155, complete genomecytochrome c oxidase, cbb3-type, subunit III1e-0861.6
NC_009138:1518315:1535688153568815376131926Herminiimonas arsenicoxydans, complete genomeputative Cytochrome c, class I:iron permease FTR11e-0861.6
NC_007492:2035761:203768520376852038638954Pseudomonas fluorescens PfO-1, complete genomeCytochrome c oxidase cbb3-type, subunit III1e-0861.2
NC_014541:2122788:213793621379362138925990Ferrimonas balearica DSM 9799 chromosome, complete genomecytochrome c oxidase, cbb3-type, subunit III3e-0860.5
NC_011992:2279752:2296859229685922987901932Acidovorax ebreus TPSY, complete genomeiron permease FTR15e-0859.3
NC_014623:464324:481184481184482158975Stigmatella aurantiaca DW4/3-1 chromosome, complete genomecytochrome c class I9e-0858.5
NC_013446:2820000:2825997282599728278981902Comamonas testosteroni CNB-2, complete genomeiron permease FTR19e-0858.5
NC_009379:435404:448269448269449207939Polynucleobacter sp. QLW-P1DMWA-1, complete genomecytochrome c oxidase, cbb3-type, subunit III3e-0757
NC_014355:781537:785237785237786010774Candidatus Nitrospira defluvii, complete genomehypothetical protein4e-0756.2
NC_015953:1756493:176211517621151762924810Streptomyces sp. SirexAA-E chromosome, complete genomecytochrome c class I5e-0755.8
NC_013422:2004478:201355920135592014536978Halothiobacillus neapolitanus c2, complete genomecytochrome c oxidase, cbb3-type, subunit III6e-0755.8
NC_015588:1965787:197223319722331973012780Isoptericola variabilis 225 chromosome, complete genomecytochrome c class I6e-0755.8
NC_008344:2434344:2437871243787124400152145Nitrosomonas eutropha C91, complete genomecopper resistance D domain protein1e-0655.1
NC_018750:2005229:201397220139722014781810Streptomyces venezuelae ATCC 10712, complete genomeubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit1e-0654.7
NC_003888:2305901:231273923127392313548810Streptomyces coelicolor A3(2), complete genomecytochrome C heme-binding subunit2e-0654.3
NC_008095:6877388:688870668887066889236531Myxococcus xanthus DK 1622, complete genomecytochrome c oxidase, cbb3-type, subunit III2e-0654.3