Pre_GI: BLASTP Hits

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Query: NC_012490:4425456:4432538 Rhodococcus erythropolis PR4, complete genome

Start: 4432538, End: 4433425, Length: 888

Host Lineage: Rhodococcus erythropolis; Rhodococcus; Nocardiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Rhodococcus erythropolis PR4 (NBRC 100887) was isolated from Pacific Ocean seawater. It has the enzymes necessary for the degradation of different alkanes, such as pristane. PR4 shows tolerance to hydrocarbons and it is capable of producing several compounds with medical, industrial, and nutritional applications such as beta-carotenes (i.e. astaxanthin) and fatty acid-containing extracellular polysaccharides (i.e. mucoidan). Rhodococcus species are soil bacteria with remarkable metabolic versatility leading to several possible applications in the pharmaceutical and chemical industries and for industrial bioremediation. This species has shown potential in producing different valuable compounds. As examples, some Rhodococcus erythropolis strains posses a nitrile hydratase, an enzyme used for the industrial production of acrylamide and nicotinamide, while other strains are capable of transforming indene to 1,2-indandiol, a key precursor of the AIDS drug Crixivan.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017093:8518961:853191985319198532890972Actinoplanes missouriensis 431, complete genomehypothetical protein7e-78290
NC_015590:145353:153201153201154082882Sinorhizobium meliloti AK83 chromosome 1, complete sequencehypothetical protein3e-1582.4
NC_008618:1526392:153285015328501533620771Bifidobacterium adolescentis ATCC 15703, complete genomepossible restriction endonuclease8e-1581.3
NC_017218:273503:280906280906281694789Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genomehypothetical protein6e-1375.1
NC_014169:231210:238629238629239417789Bifidobacterium longum subsp. longum JDM301 chromosome, completerestriction endonuclease6e-1375.1
NC_014638:183115:197199197199197990792Bifidobacterium bifidum PRL2010 chromosome, complete genometype II restriction-modification system restriction subunit6e-1271.6
NC_008800:575141:589409589409590173765Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,hypothetical protein3e-1169.3
NC_015224:610807:622685622685623449765Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,hypothetical protein1e-1067.4
NC_014033:772754:784512784512785339828Prevotella ruminicola 23 chromosome, complete genomehypothetical protein2e-1066.6
NC_012912:4167429:418072641807264181598873Dickeya zeae Ech1591, complete genomehypothetical protein5e-1065.1
NC_013209:2476039:248321524832152484177963Acetobacter pasteurianus IFO 3283-01, complete genomehypothetical protein5e-1065.1
NC_017100:2476822:248442224844222485384963Acetobacter pasteurianus IFO 3283-03, complete genomehypothetical protein5e-1065.1
NC_017108:2474583:248175924817592482721963Acetobacter pasteurianus IFO 3283-12, complete genomehypothetical protein5e-1065.1
NC_017111:2474601:248177724817772482739963Acetobacter pasteurianus IFO 3283-32, complete genomehypothetical protein5e-1065.1
NC_017121:2474588:248176424817642482726963Acetobacter pasteurianus IFO 3283-07, complete genomehypothetical protein5e-1065.1
NC_017125:2476802:248440224844022485364963Acetobacter pasteurianus IFO 3283-22, complete genomehypothetical protein5e-1065.1
NC_017146:2476844:248444424844442485406963Acetobacter pasteurianus IFO 3283-26, complete genomehypothetical protein5e-1065.1
NC_017150:2383361:239096123909612391923963Acetobacter pasteurianus IFO 3283-01-42C, complete genomehypothetical protein5e-1065.1
NC_007645:5747721:575324057532405753959720Hahella chejuensis KCTC 2396, complete genomepredicted restriction endonuclease7e-1064.7
NC_009656:6224221:624468362446836245624942Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein1e-0963.9
NC_016510:1749967:175462017546201755393774Flavobacterium columnare ATCC 49512 chromosome, complete genomerestriction endonuclease1e-0963.9
NC_015711:3122000:312514631251463125949804Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein2e-0963.5
NC_008529:1042220:105313110531311053916786Lactobacillus delbrueckii subsp. bulgaricus ATCC BAA-365, completePredicted restriction endonuclease3e-0962.8
NC_017986:1885613:191158619115861912419834Pseudomonas putida ND6 chromosome, complete genomehypothetical protein3e-0962.4
NC_015572:3091707:309988330998833100662780Methylomonas methanica MC09 chromosome, complete genomehypothetical protein4e-0962.4
NC_014306:4376012:439702443970244397896873Erwinia billingiae Eb661, complete genomeConserved uncharacterized protein5e-0962
NC_012856:207194:221844221844222791948Ralstonia pickettii 12D chromosome 1, complete genomehypothetical protein7e-0961.6
NC_013421:1819036:182912118291211829996876Pectobacterium wasabiae WPP163, complete genomehypothetical protein6e-0961.6
NC_010995:4460413:447291044729104473668759Cellvibrio japonicus Ueda107, complete genomehypothetical protein2e-0860.1
NC_015436:1287873:130861913086191309524906Spirochaeta coccoides DSM 17374 chromosome, complete genomehypothetical protein2e-0860.1
NC_008686:1472899:148270214827021483478777Paracoccus denitrificans PD1222 chromosome 1, complete sequenceputative restriction endonuclease2e-0859.7
NC_016818:4215836:423289242328924233764873Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeputative restriction endonuclease3e-0859.7
NC_007712:2978000:298900229890022989754753Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein9e-0857.8
NC_014923:2888723:289292728929272893922996Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completehypothetical protein9e-0857.8
NC_010067:3056774:307063430706343071506873Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-0757
NC_010172:280092:294982294982295788807Methylobacterium extorquens PA1, complete genomeputative restriction endonuclease3e-0756.2
NC_010002:5143869:515651451565145157449936Delftia acidovorans SPH-1, complete genomehypothetical protein3e-0756.2
NC_012778:1819559:1856313185631318574731161Eubacterium eligens ATCC 27750, complete genomeputative restriction endonuclease3e-0755.8
NC_011059:65414:693516935170124774Prosthecochloris aestuarii DSM 271, complete genomeputative restriction endonuclease5e-0755.5
NC_012811:1105395:111214011121401112946807Methylobacterium extorquens AM1 megaplasmid, complete sequenceputative restriction endonuclease5e-0755.1
NC_009436:522649:545015545015545908894Enterobacter sp. 638, complete genomehypothetical protein1e-0654.3
NC_013850:4829455:483627748362774837146870Klebsiella variicola At-22 chromosome, complete genomehypothetical protein1e-0654.3
NC_006677:1596560:166093616609361661688753Gluconobacter oxydans 621H, complete genomePutative restriction endonuclease9e-0754.3
NC_020211:554736:564967564967565842876Serratia marcescens WW4, complete genomeHNH nuclease1e-0653.9
NC_016845:575123:598562598562599431870Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein1e-0653.9
NC_015381:1588742:159024015902401591226987Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein1e-0653.9
NC_011283:4966471:497394749739474974816870Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein1e-0653.9
NC_011138:3881446:388994938899493890719771Alteromonas macleodii 'Deep ecotype', complete genomehypothetical protein1e-0653.9
NC_009665:3869904:388223138822313883046816Shewanella baltica OS185 chromosome, complete genomehypothetical protein3e-0652.8
NC_012125:4716000:473747647374764738351876Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein4e-0652.4
NC_006905:4638707:466016146601614661036876Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein4e-0652.4
NC_004631:4687270:469954046995404700415876Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein4e-0652.4
NC_011149:4677412:470819447081944709069876Salmonella enterica subsp. enterica serovar Agona str. SL483,HNH nuclease6e-0651.6
NC_011294:4560902:458020745802074580917711Salmonella enterica subsp. enterica serovar Enteritidis strhypothetical protein1e-0551.2
NC_011205:4718239:473754547375454738255711Salmonella enterica subsp. enterica serovar Dublin str. CT_020218531e-0551.2