Pre_GI: BLASTP Hits

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Query: NC_012488:2719955:2728875 Listeria monocytogenes Clip81459, complete genome

Start: 2728875, End: 2729180, Length: 306

Host Lineage: Listeria monocytogenes; Listeria; Listeriaceae; Bacillales; Firmicutes; Bacteria

General Information: During an outbreak of listeriosis aming patients with AIDS in California, USA in 1985. This organism, which causes listeriosis, is one of the leading causes of death from food-borne pathogens especially in pregnant women, newborns, the elderly, and immunocompromised individuals. It is found in environments such as decaying vegetable matter, sewage, water, and soil, and it can survive extremes of both temperatures (1-45 degrees C) and salt concentration marking it as an extremely dangerous food-born pathogen, especially on food that is not reheated. This organism is enteroinvasive, and utilizes an actin-based motility system by using a surface protein, ActA, that promotes actin polymerization, to spread intercellularly using the polymerized cytoskeletal protein as a "motor".




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003210:2749538:275760627576062757911306Listeria monocytogenes EGD-e, complete genomehypothetical protein6e-36149
NC_011660:2839201:285040128504012850706306Listeria monocytogenes HCC23 chromosome, complete genomePTS system lichenan-specific transporter subunit IIB7e-36149
NC_002973:2701983:271090327109032711208306Listeria monocytogenes str. 4b F2365, complete genomePTS system, beta-glucoside-specific, IIB component7e-36149
NC_003212:2837366:284754828475482847853306Listeria innocua Clip11262, complete genomehypothetical protein2e-35147
NC_013766:171889:183986183986184291306Listeria monocytogenes 08-5578 chromosome, complete genomehypothetical protein2e-35147
NC_013768:171889:183986183986184291306Listeria monocytogenes 08-5923, complete genomehypothetical protein2e-35147
NC_013891:2643085:265318026531802653485306Listeria seeligeri serovar 1/2b str. SLCC3954, complete genomePTS system, beta-glucoside-specific, IIB component2e-35147
NC_014219:192555:196401196401196712312Bacillus selenitireducens MLS10 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit6e-1889.4
NC_016605:132253:137529137529137843315Pediococcus claussenii ATCC BAA-344 chromosome, complete genomePTS system, Lactose/Cellobiose specific IIB subunit1e-1685.1
NC_010582:1771591:177329017732901773607318Streptococcus pneumoniae CGSP14, complete genomePTS system, IIB component8e-1475.9
NC_008261:2743942:276488027648802765209330Clostridium perfringens ATCC 13124, complete genomePTS system, lactose/cellobiose-specific IIB component6e-1475.9
NC_013716:4306695:434691043469104347224315Citrobacter rodentium ICC168, complete genomePTS system, cellobiose-specific IIb component1e-1272
NC_009778:259241:260583260583260897315Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-1271.2
NC_013282:3719500:373649737364973736811315Cronobacter turicensis, complete genomeCellobiose-specific phosphotransferase enzyme IIB component2e-1271.2
NC_020260:263528:264870264870265184315Cronobacter sakazakii Sp291, complete genomecellobiose-specific phosphotransferase enzyme IIB component2e-1271.2
NC_020291:5409587:542631754263175426616300Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomephosphotransferase system cellobiose-specific component IIB3e-1270.5
NC_020181:1344259:134559613455961345907312Enterobacter aerogenes EA1509E, complete genomePTS system, cellobiose-specific IIB component4e-1270.1
NC_012912:844339:850144850144850461318Dickeya zeae Ech1591, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit2e-1167.8
NC_019978:2532640:255213725521372552451315Halobacteroides halobius DSM 5150, complete genomephosphotransferase system cellobiose-specific component IIB3e-1167.4
NC_008800:4488112:449114944911494491463315Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,pts system, cellobiose-specific IIB component4e-1166.6
NC_008563:1651270:166317316631731663484312Escherichia coli APEC O1, complete genomePTS system, cellobiose-specific IIB component2e-1064.7
NC_008262:2824503:283714728371472837449303Clostridium perfringens SM101, complete genomePTS system, IIB component2e-1064.3
NC_016902:2361628:236762323676232367934312Escherichia coli KO11FL chromosome, complete genomePTS system lactose/cellobiose-specific transporter subunit IIB2e-1064.3
NC_011741:1625535:163596316359631636274312Escherichia coli IAI1 chromosome, complete genomeputative cellobiose-specific phosphotransferase enzyme IIB component2e-1064.3
NC_011415:1715644:172607217260721726383312Escherichia coli SE11 chromosome, complete genomePTS system cellobiose-specific IIB component2e-1064.3
CU928160:1625535:163596316359631636274312Escherichia coli IAI1 chromosome, complete genomeputative cellobiose-specific phosphotransferase enzyme IIB component2e-1064.3
CP002516:2361628:236762323676232367934312Escherichia coli KO11, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit2e-1064.3
CP002185:1727493:173792117379211738232312Escherichia coli W, complete genomePTS system, cellobiose family IIB component2e-1064.3
NC_010498:1615980:162358916235891623900312Escherichia coli SMS-3-5, complete genomePTS system lactose/cellobiose family IIB subunit2e-1064.3
NC_009800:1632585:164205316420531642364312Escherichia coli HS, complete genomePTS system, lactose/cellobiose family IIB component3e-1063.5
NC_016845:2781438:278784727878472788170324Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,lactose/cellobiose-specific PTS family enzyme IIB component2e-0961.2
NC_012731:2739964:274637427463742746697324Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomelactose/cellobiose-specific PTS family enzyme IIB component2e-0961.2
NC_020995:3252500:325769332576933258004312Enterococcus casseliflavus EC20, complete genomehypothetical protein6e-0959.7
NC_016641:373623:386847386847387170324Paenibacillus terrae HPL-003 chromosome, complete genomePTS system lichenan-specific transporter subunit IIB5e-0856.6
NC_012912:1200000:121510112151011215406306Dickeya zeae Ech1591, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit2e-0754.7
NC_014377:321949:337203337203337511309Thermosediminibacter oceani DSM 16646 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit4e-0753.5
NC_008800:1090000:109008010900801090397318Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,PTS system N,N'-diacetylchitobiose-specific transporter subunit IIB2e-0650.8
NC_015224:3587500:361237436123743612691318Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,N,N'-diacetylchitobiose-specific PTS system transporter subunit IIB2e-0650.8
NC_015389:114469:122668122668122979312Coriobacterium glomerans PW2 chromosome, complete genomephosphotransferase system lactose/cellobiose-specific IIB subunit5e-0649.7