Pre_GI: BLASTP Hits

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Query: NC_012125:2531817:2545361 Salmonella enterica subsp. enterica serovar Paratyphi C strain

Start: 2545361, End: 2546149, Length: 789

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: The genome of this strain harbors a large pathogenicity island, SPI7, with genes coding for the Vi (virulence) antigen and other genes potentially associated with virulence. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_006905:1342474:135982313598231360611789Salmonella enterica subsp. enterica serovar Choleraesuis strputative envelope lipoprotein3e-140497
NC_010102:1779707:179324917932491794037789Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-140497
NC_011080:1321268:132997913299791330767789Salmonella enterica subsp. enterica serovar Newport str. SL254,EnvF3e-140497
NC_011083:1323827:133323213332321334020789Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,EnvF2e-139494
NC_016860:1317174:132587613258761326664789Salmonella enterica subsp. enterica serovar Typhimurium strputative envelope lipoprotein8e-139492
NC_003197:1320861:132818913281891328977789Salmonella typhimurium LT2, complete genomeputative envelope lipoprotein8e-139492
NC_016857:1276340:128504212850421285914873Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74EnvF5e-138490
NC_011149:1870931:188448618844861885274789Salmonella enterica subsp. enterica serovar Agona str. SL483,EnvF4e-138490
NC_017046:1277787:128511512851151285903789Salmonella enterica subsp. enterica serovar Typhimurium str. 798lipoprotein6e-138489
NC_016863:1277652:128635412863541287142789Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative envelope lipoprotein6e-138489
NC_016856:1326503:133816413381641338952789Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative envelope lipoprotein6e-138489
NC_016810:1276340:128504212850421285830789Salmonella enterica subsp. enterica serovar Typhimurium strlipoprotein6e-138489
NC_016831:1083871:109130310913031092010708Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein2e-120431
NC_011205:2024458:203800220380022038682681Salmonella enterica subsp. enterica serovar Dublin str. CT_020218539e-119426