Pre_GI: BLASTP Hits

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Query: NC_011987:53760:77566 Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequence

Start: 77566, End: 79683, Length: 2118

Host Lineage: Agrobacterium tumefaciens; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: This strain has been developed for worldwide commercial use to control crown gall. This species is used commercially to control crown gall, a tumorogenic plant disease caused by the ubiquitous soil-borne pathogen Agrobacterium tumefaciens, which affects susceptible woody plants worldwide. The pathogen is responsible for nursery and orchard losses among stone fruit trees, grapes, apples, pears, nut trees, caneberries, clematis, hops, kiwifruit, persimmons, roses and many ornamental annuals, trees and shrubs. Infected plants are usually weakened and unproductive due to their damaged root system.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013194:69634:9616196161982392079Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeResolvase domain protein2e-180632
NC_013193:38918:5955059550616282079Candidatus Accumulibacter phosphatis clade IIA str. UW-1 plasmidhypothetical protein2e-179629
NC_012586:897148:9182429182429203262085Rhizobium sp. NGR234 plasmid pNGR234b, complete sequenceputative transposase number 4 for insertion sequence NGRIS-4f2e-172606
NC_012587:2326000:2327063232706323291472085Rhizobium sp. NGR234, complete genomeputative transposase number 4 for insertions sequence NGRIS-4c2e-172606
NC_002678:4885790:4888299488829948903772079Mesorhizobium loti MAFF303099, complete genometransposase1e-168593
NC_010623:1871492:1924327192432719264112085Burkholderia phymatum STM815 chromosome 2, complete sequenceResolvase domain protein1e-167590
NC_010623:1961685:1980730198073019828142085Burkholderia phymatum STM815 chromosome 2, complete sequenceResolvase domain protein1e-167590
NC_010162:5631325:5641297564129756434172121Sorangium cellulosum 'So ce 56', complete genomerecombinase2e-113410
NC_008278:5012000:5017819501781950198612043Frankia alni ACN14a, complete genomePutative transposase.5e-101369
NC_009921:522000:5417775417775439452169Frankia sp. EAN1pec, complete genomeResolvase domain2e-95350
NC_015730:3662934:3678402367840236804862085Roseobacter litoralis Och 149 chromosome, complete genomeputative resolvase/recombinase4e-84313
NC_015730:3693391:3694061369406136961452085Roseobacter litoralis Och 149 chromosome, complete genomeputative resolvase/recombinase4e-84313
NC_019892:2816549:2830130283013028323342205Singulisphaera acidiphila DSM 18658 chromosome, complete genomesite-specific recombinase, DNA invertase Pin5e-84312
NC_008760:27967:2796727967300362070Polaromonas naphthalenivorans CJ2 plasmid pPNAP04, completeRecombinase2e-83310
NC_009921:8215996:8248683824868382506531971Frankia sp. EAN1pec, complete genomeResolvase domain4e-80300
NC_013860:171235:1904221904221925122091Azospirillum sp. B510 plasmid pAB510f, complete sequenceresolvase7e-78292
NC_013856:692000:6945656945656966552091Azospirillum sp. B510 plasmid pAB510b, complete sequencetransposase6e-78292
NC_016588:133943:1412191412191433092091Azospirillum lipoferum 4B plasmid AZO_p6, complete sequenceputative resolvase1e-77291
NC_008435:1215437:1221109122110912226561548Rhodopseudomonas palustris BisA53, complete genomeRecombinase7e-74278
NC_013216:3473119:3484011348401134857501740Desulfotomaculum acetoxidans DSM 771, complete genomeresolvase domain-containing protein1e-67258
NC_015957:196000:209711209711210172462Streptomyces violaceusniger Tu 4113 chromosome, complete genomeResolvase domain-containing protein9e-28125
NC_014722:1191380:1200152120015212012251074Burkholderia rhizoxinica HKI 454, complete genomesite-specific DNA recombinase2e-1481.6
NC_014365:2037506:2051634205163420532201587Desulfarculus baarsii DSM 2075 chromosome, complete genomeResolvase domain protein3e-1480.9
NC_007432:654904:7003617003617017071347Streptococcus agalactiae A909, complete genomeprophage LambdaSa04, site-specific recombinase, resolvase family7e-1479.7
NC_010125:1051735:106814810681481068486339Gluconacetobacter diazotrophicus PAl 5, complete genome1e-1378.6
NC_011898:2509267:2510829251082925123431515Clostridium cellulolyticum H10, complete genomeRecombinase7e-1376.6
NC_007296:1073784:1081126108112610828051680Streptococcus pyogenes MGAS6180, complete genomesite-specific recombinase1e-1172.4
NC_012470:1390285:1409368140936814110501683Streptococcus equi subsp. zooepidemicus, complete genomesite-specific recombinase1e-1172
NC_010516:2676746:2710517271051727120311515Clostridium botulinum B1 str. Okra, complete genomeresolvase family protein2e-1171.6
NC_015977:2309873:2331366233136623330421677Roseburia hominis A2-183 chromosome, complete genomesite-specific recombinase2e-1171.2
NC_008530:1454118:1480338148033814819991662Lactobacillus gasseri ATCC 33323, complete genomeSite-specific recombinase, DNA invertase Pin related protein3e-1171.2
NC_006510:887545:8999548999549014261473Geobacillus kaustophilus HTA426, complete genomesite-specific recombinase (resolvase family)4e-1170.5
NC_014246:1402500:1413798141379814150481251Mobiluncus curtisii ATCC 43063 chromosome, complete genomesite-specific recombinase7e-1169.7
NC_007645:5801295:5813910581391058152651356Hahella chejuensis KCTC 2396, complete genomeSite-specific recombinase2e-1068.6
NC_007645:5724000:5743484574348457448391356Hahella chejuensis KCTC 2396, complete genomeSite-specific recombinase3e-1067.8
NC_021064:2001786:2012303201230320135531251Propionibacterium avidum 44067, complete genomerecombinase5e-1067
NC_014366:2826575:2833647283364728350021356Gamma proteobacterium HdN1, complete genomePredicted site-specific recombinase6e-1066.6
NC_014246:1402500:1412236141223614137981563Mobiluncus curtisii ATCC 43063 chromosome, complete genomesite-specific recombinase1e-0965.9
NC_012793:383612:3892203892203907161497Geobacillus sp. WCH70, complete genomeRecombinase2e-0964.7
NC_006510:591339:6202266202266216801455Geobacillus kaustophilus HTA426, complete genomecassette chromosome recombinase B2e-0964.7
NC_016593:596500:6317386317386331921455Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completeresolvase domain-containing protein2e-0964.7
NC_011365:1171536:1204634120463412063221689Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeResolvase domain3e-0964.3
NC_015660:3174424:3178571317857131800281458Geobacillus thermoglucosidasius C56-YS93 chromosome, completeResolvase domain-containing protein4e-0963.9
NC_009706:3882500:3892814389281438943881575Clostridium kluyveri DSM 555 chromosome, complete genomehypothetical protein4e-0963.9
NC_011837:3814000:3824317382431738258911575Clostridium kluyveri NBRC 12016, complete genomehypothetical protein4e-0963.9
NC_014219:3188128:3199496319949632009321437Bacillus selenitireducens MLS10 chromosome, complete genomeResolvase domain protein3e-0963.9
NC_016048:2873669:2899366289936629008921527Oscillibacter valericigenes Sjm18-20, complete genomeputative site-specific recombinase3e-0963.9
NC_009089:3935500:3938102393810239398621761Clostridium difficile 630, complete genomeputative conjugative transposon recombinase7e-0963.2
NC_014915:2963500:3002419300241930038071389Geobacillus sp. Y412MC52 chromosome, complete genomeResolvase domain protein8e-0962.8
NC_013411:597235:6001286001286015161389Geobacillus sp. Y412MC61, complete genomeResolvase domain protein8e-0962.8
NC_014376:2964731:2974851297485129762241374Clostridium saccharolyticum WM1 chromosome, complete genomeResolvase domain protein2e-0862
NC_011898:3367457:3370767337076733723381572Clostridium cellulolyticum H10, complete genomeResolvase domain protein1e-0862
NC_010003:449192:4623954623954639631569Petrotoga mobilis SJ95, complete genomeResolvase domain1e-0862
NC_014828:1987487:1994530199453019961131584Ethanoligenens harbinense YUAN-3 chromosome, complete genomeResolvase domain2e-0861.6
NC_016627:4159406:4177744417774441795251782Clostridium clariflavum DSM 19732 chromosome, complete genomesite-specific recombinase, DNA invertase Pin3e-0861.2
NC_003295:921256:9375829375829389641383Ralstonia solanacearum GMI1000, complete genomePUTATIVE SITE-SPECIFIC INTEGRASE/RECOMBINASE PROTEIN3e-0861.2
NC_016048:2873669:2896091289609128977101620Oscillibacter valericigenes Sjm18-20, complete genomeputative site-specific recombinase3e-0861.2
NC_015500:1204501:1222227122222712239061680Treponema brennaborense DSM 12168 chromosome, complete genomeRecombinase2e-0861.2
NC_004668:2198027:2204960220496022065731614Enterococcus faecalis V583, complete genomesite-specific recombinase, resolvase family, putative3e-0860.8
NC_015697:506494:5307365307365322891554Lactobacillus reuteri SD2112 chromosome, complete genomephage integrase family site-specific recombinase4e-0860.8
NC_009706:2925000:2935636293563629368411206Clostridium kluyveri DSM 555 chromosome, complete genomerecombinase-like protein4e-0860.5
NC_011837:2856500:2867138286713828683431206Clostridium kluyveri NBRC 12016, complete genomehypothetical protein4e-0860.5
NC_008530:1454118:1482038148203814835581521Lactobacillus gasseri ATCC 33323, complete genomeSite-specific recombinase, DNA invertase Pin related protein4e-0860.5
NC_004757:2730057:2780172278017227815271356Nitrosomonas europaea ATCC 19718, complete genomeSite-specific recombinase4e-0860.5
NC_016627:4323370:4329798432979843313661569Clostridium clariflavum DSM 19732 chromosome, complete genomesite-specific recombinase, DNA invertase Pin7e-0859.7
NC_017249:8165826:818919381891938189819627Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein2e-0758.5
NC_008686:95326:9609496094977431650Paracoccus denitrificans PD1222 chromosome 1, complete sequenceRecombinase2e-0758.2
NC_008609:251608:2686712686712701731503Pelobacter propionicus DSM 2379, complete genomeResolvase, N-terminal domain3e-0757.8
NC_014393:4775452:4836596483659648378281233Clostridium cellulovorans 743B chromosome, complete genomeResolvase domain3e-0757.8
NC_014376:3399366:3414149341414934157231575Clostridium saccharolyticum WM1 chromosome, complete genomeResolvase domain protein3e-0757.4
NC_013440:1131376:1154285115428511558891605Haliangium ochraceum DSM 14365, complete genomeResolvase domain protein4e-0757.4
NC_013440:1580802:1592997159299715946011605Haliangium ochraceum DSM 14365, complete genomeResolvase domain protein4e-0757.4
NC_010337:98974:1166181166181182281611Heliobacterium modesticaldum Ice1, complete genomeresolvase, n-terminal:recombinase, putative5e-0757
NC_018870:757416:8049218049218065311611Thermacetogenium phaeum DSM 12270 chromosome, complete genomeresolvase YokA5e-0757
NC_015977:2874000:2893300289330028949851686Roseburia hominis A2-183 chromosome, complete genomesite-specific recombinase6e-0756.6
NC_016027:2446806:2457542245754224592301689Gluconacetobacter xylinus NBRC 3288, complete genomeDNA resolvase9e-0756.2
NC_015673:1038673:1055311105531110568791569Corynebacterium resistens DSM 45100 chromosome, complete genomeprophage resolvase8e-0756.2
NC_013440:1317982:1320107132010713217111605Haliangium ochraceum DSM 14365, complete genomeResolvase domain protein7e-0756.2
NC_010337:2793667:2817618281761828191951578Heliobacterium modesticaldum Ice1, complete genomeDNA recombinase, putative1e-0655.8
NC_017068:1480148:1480148148014814823132166Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative DNA recombinase3e-0654.3
NC_010814:294394:3073493073493088511503Geobacter lovleyi SZ, complete genomeResolvase domain3e-0654.3
NC_012914:5446366:5467858546785854693391482Paenibacillus sp. JDR-2, complete genomeResolvase domain protein3e-0654.3
NC_015976:2187377:2193567219356721952611695Sphingobium sp. SYK-6, complete genomeputative recombinase4e-0653.9
NC_006513:286549:3057543057543071871434Azoarcus sp. EbN1, complete genomesite-specific recombinases5e-0653.5
NC_011386:763111:7778747778747791811308Oligotropha carboxidovorans OM5, complete genomeresolvase6e-0653.5
NC_015684:3340519:3345276334527633465831308Oligotropha carboxidovorans OM5 chromosome, complete genomesite-specific recombinases/DNA6e-0653.5
NC_006322:4149500:4174019417401941752631245Bacillus licheniformis ATCC 14580, complete genomeSpoIVCA1e-0552.8
NC_006270:4149004:4173904417390441751481245Bacillus licheniformis ATCC 14580, complete genomesite-specific DNA recombinase1e-0552.8