Pre_GI Gene

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Host: NC_010162 NEIGHBOURS BLASTN Download Island sequence Download Island gene sequence(s)

NC_010162:5631325 Sorangium cellulosum 'So ce 56', complete genome

Host Lineage: Sorangium cellulosum; Sorangium; Polyangiaceae; Myxococcales; Proteobacteria; Bacteria

General Information: Sorangium cellulosum 'So ce 56' produces a large number of bioactive compounds, such as, the antifungal soraphen and the anticancer agent epothilone. This organism, like other myxobacteria, undergoes a complex development and differentiation pathway. When cell density increases, the organism switches to "social motility" where aggregates of cells can gather together into masses termed fruiting bodies that may consist of up to 100 000 cells. The motility system is not dependent on flagella like most bacteria, but instead relies on twitching pili: short extracellular appendages that may function analogously to oars in a rowboat. The myxobacteria have proved to be a rich source of novel natural products. Sorangium cellulosum produces a number of antibacterial, antifungal and cytotoxic substances which are being studies for therapeutic applications.

StartEndLengthCDS descriptionQuickGO ontologyBLASTP
56313255632266942hypothetical proteinBLASTP
563233456338661533hypothetical protein
56340305634425396hypothetical protein
56345895634975387hypothetical proteinBLASTP
56350985635316219hypothetical protein
563546056366441185lipaseQuickGO ontologyBLASTP
56371675637808642putative secreted proteinQuickGO ontology
56378155638486672putative secreted proteinQuickGO ontology
56385485639270723integrin alpha-V precursorQuickGO ontologyBLASTP
563942756409861560putative secreted proteinQuickGO ontologyBLASTP
564129756434172121recombinaseQuickGO ontologyBLASTP
564408956452521164transposaseQuickGO ontologyBLASTP
56457675646351585hypothetical proteinBLASTP
564641756482401824protein kinaseQuickGO ontologyBLASTP
56482455649123879hypothetical protein
56491235649983861hypothetical proteinBLASTP