Pre_GI: BLASTP Hits

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Query: NC_011982:206784:215346 Agrobacterium vitis S4 plasmid pTiS4, complete sequence

Start: 215346, End: 217517, Length: 2172

Host Lineage: Agrobacterium vitis; Agrobacterium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Agrobacterium vitis is the causative agent of crown gall disease in grapes. Agrobacterium are Gram-negative, motile, soil-dwelling plant pathogens with the species name given based on the disease phenotype associated with the bacteria. Disease causing Agrobacterium spp. possess a tumor-inducing (Ti) plasmid, which carries genes for the formation of opines. A segment of the Ti plasmid gets transferred to the plant cell and integrates into the host cell genome. The plant cell then starts synthesizing opines, which can be catabolized by Agrobacterium spp, but not by the plant cells.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_003308:1:1637216372186392268Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequencetryptophan 2-monooxygenase0646
NC_003065:27163:4977549775520422268Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequencetryptophan monooxygenase0646
NC_007005:1705406:1725786172578617274591674Pseudomonas syringae pv. syringae B728a, complete genomeAmine oxidase1e-142507
NC_014120:88679:98514985141002021689Burkholderia sp. CCGE1002 plasmid pBC201, complete sequenceamine oxidase1e-136487
NC_010627:532407:5405945405945422821689Burkholderia phymatum STM815 plasmid pBPHY02, complete sequenceamine oxidase5e-135482
NC_009255:1250939:1250939125093912526361698Burkholderia vietnamiensis G4 chromosome 2, complete sequenceamine oxidase3e-121436
NC_014158:1479313:1480790148079014824871698Tsukamurella paurometabola DSM 20162 chromosome, complete genomeamine oxidase5e-48193
NC_009512:469000:4723704723704740521683Pseudomonas putida F1, complete genomeamine oxidase5e-43176
NC_015733:443122:4463894463894480711683Pseudomonas putida S16 chromosome, complete genomeamine oxidase3e-42173
NC_015379:6226661:6254940625494062566221683Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative oxidoreductase6e-39162
NC_004193:1335626:1336825133682513382821458Oceanobacillus iheyensis HTE831, complete genomeL-amino acid oxidase7e-0963.2
NC_010501:1286971:1302023130202313039571935Pseudomonas putida W619, complete genomeamine oxidase2e-0862
NC_010674:2417199:2418257241825724199751719Clostridium botulinum B str. Eklund 17B, complete genomeputative flavin containing amine oxidoreductase5e-0860.1
NC_014976:170683:1858431858431872671425Bacillus subtilis BSn5 chromosome, complete genomeamine oxidase, flavin-containing1e-0758.9
NC_020244:2049753:2066634206663420681331500Bacillus subtilis XF-1, complete genomehypothetical protein8e-0756.2
NC_017506:1660072:1676164167616416786142451Marinobacter adhaerens HP15 chromosome, complete genomeoxidoreductase FAD/FMN-binding protein2e-0655.1