Pre_GI: BLASTP Hits

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Query: NC_011979:2352961:2379475 Geobacter sp. FRC-32, complete genome

Start: 2379475, End: 2379684, Length: 210

Host Lineage: Geobacter daltonii; Geobacter; Geobacteraceae; Desulfuromonadales; Proteobacteria; Bacteria

General Information: This organism is able to reduce uranium and may be useful for in situ bioremediation of uranium. An iron(III)-reducing bacterium isolated from the uranium-contaminated subsurface of the U.S. Department of Energy NABIR Field Research Center (FRC), Oak Ridge, Tennessee, USA. Several recent studies have verified using cultivation-independent methods that the Geobacteraceae are predominant in subsurface environments where dissimilatory metal reduction is important to the remediation of uranium and other contaminants.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009483:3727490:373295637329563733165210Geobacter uraniireducens Rf4 chromosome, complete genomeDNA-directed RNA polymerase subunit omega2e-30130
NC_007517:2632233:263444326344432634652210Geobacter metallireducens GS-15, complete genomeRNA polymerase, omega subunit1e-28124
NC_007498:1491223:150726115072611507467207Pelobacter carbinolicus DSM 2380, complete genomeDNA-directed RNA polymerase, omega subunit1e-21102
NC_009138:2110500:213021721302172130420204Herminiimonas arsenicoxydans, complete genomeDNA-directed RNA polymerase omega chain (RNAP omega subunit) (Transcriptase omega chain) (RNA polymerase omega subunit)4e-1270.1
NC_015381:992401:101896410189641019167204Burkholderia gladioli BSR3 chromosome 1, complete sequenceDNA-directed RNA polymerase subunit omega5e-1269.7
NC_014752:617987:620224620224620430207Neisseria lactamica ST-640, complete genomeDNA-directed RNA polymerase omega chain7e-1269.3
NC_014532:3967463:398471239847123984990279Halomonas elongata DSM 2581, complete genomeDNA-directed RNA polymerase subunit omega2e-1064.7
NC_015696:1749863:175984117598411760059219Francisella sp. TX077308 chromosome, complete genomeDNA-directed RNA polymerase subunit omega4e-0960.1
NC_014366:354000:373619373619373861243Gamma proteobacterium HdN1, complete genomeDNA-directed RNA polymerase omega chain5e-0959.7
NC_007880:1456705:146332214633221463540219Francisella tularensis subsp. holarctica, complete genomeDNA-directed RNA polymerase omega subunit8e-0959.3
NC_007912:4661141:468121346812134681485273Saccharophagus degradans 2-40, complete genomeDNA-directed RNA polymerase, omega subunit7e-0959.3
NC_016937:707279:721959721959722177219Francisella tularensis subsp. tularensis TI0902 chromosome,DNA-directed RNA polymerase subunit omega1e-0858.5
NC_016933:783938:797866797866798084219Francisella tularensis TIGB03 chromosome, complete genomeDNA-directed RNA polymerase subunit omega1e-0858.5
NC_008601:631504:645826645826646044219Francisella tularensis subsp. novicida U112, complete genomeDNA-directed RNA polymerase, subunit K/omega1e-0858.5
NC_006570:707280:721960721960722178219Francisella tularensis subsp. tularensis Schu 4, complete genomeDNA-directed RNA polymerase omega subunit1e-0858.5
NC_008245:707984:721912721912722130219Francisella tularensis subsp. tularensis FSC 198, complete genomeDNA-directed RNA polymerase omega subunit1e-0858.5
NC_013508:26348:324733247332748276Edwardsiella tarda EIB202, complete genomeDNA-directed RNA polymerase, subunit omega2e-0858.2
NC_010336:213148:240634240634240852219Francisella philomiragia subsp. philomiragia ATCC 25017, completeDNA-directed RNA polymerase, subunit K/omega2e-0858.2
NC_013716:4306695:439799943979994398274276Citrobacter rodentium ICC168, complete genomeDNA-directed RNA polymerase omega chain3e-0857.4
NC_004337:3590323:379242237924223792697276Shigella flexneri 2a str. 301, complete genomeDNA-directed RNA polymerase omega subunit3e-0857.4
NC_016845:5162481:518149451814945181769276Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,DNA-directed RNA polymerase subunit omega4e-0857
NC_012731:5074000:509301950930195093294276Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeDNA-directed RNA polymerase subunit omega4e-0857
NC_011283:105245:105245105245105520276Klebsiella pneumoniae 342 chromosome, complete genomeDNA-directed RNA polymerase subunit omega4e-0857
NC_011094:3778000:381893838189383819213276Salmonella enterica subsp. enterica serovar Schwarzengrund strDNA-directed RNA polymerase subunit omega4e-0857
NC_009648:4359875:437883943788394379114276Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeDNA-directed RNA polymerase subunit omega4e-0857
NC_009778:4014026:403162540316254031900276Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein4e-0857
NC_020260:4029951:404756340475634047838276Cronobacter sakazakii Sp291, complete genomeDNA-directed RNA polymerase subunit omega4e-0857
NC_015722:4539:507750775448372Candidatus Midichloria mitochondrii IricVA chromosome, completeDNA-directed RNA polymerase subunit omega4e-0856.6
NC_020064:4751097:477141747714174771692276Serratia marcescens FGI94, complete genomeDNA-directed RNA polymerase, omega subunit4e-0856.6
NC_005126:274000:290628290628290918291Photorhabdus luminescens subsp. laumondii TTO1, complete genomeDNA-directed RNA polymerase omega subunit5e-0856.2
NC_009832:5369566:539112653911265391401276Serratia proteamaculans 568, complete genomeDNA-directed RNA polymerase, omega subunit7e-0856.2
NC_013956:4326388:434453943445394344814276Pantoea ananatis LMG 20103 chromosome, complete genomeRpoZ1e-0755.5
NC_016816:127802:129931129931130206276Pantoea ananatis LMG 5342, complete genomeDNA-directed RNA polymerase subunit omega1e-0755.5
NC_010694:63654:657976579766072276Erwinia tasmaniensis, complete genomeDNA-directed RNA polymerase omega chain1e-0755.5
NC_013961:73037:751807518075455276Erwinia amylovora, complete genomeDNA-directed RNA polymerase omega chain1e-0755.5
NC_013971:73037:751807518075455276Erwinia amylovora ATCC 49946 chromosome, complete genomeDNA-directed RNA polymerase subunit omega1e-0755.5
NC_008800:36500:577415774158016276Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,DNA-directed RNA polymerase subunit omega2e-0754.3
NC_008309:1628939:165109316510931651365273Haemophilus somnus 129PT, complete genomeDNA-directed RNA polymerase, omega chain6e-0752.8