Pre_GI: BLASTP Hits

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Query: NC_011961:891815:914189 Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence

Start: 914189, End: 915154, Length: 966

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010645:1341475:1361237136123713622411005Bordetella avium 197N, complete genomecatechol 2,3-dioxygenase (metapyrocatechase)4e-55215
NC_003911:3864852:389731638973163898296981Silicibacter pomeroyi DSS-3, complete genomeextradiol ring-cleavage dioxygenase family protein1e-52206
NC_014650:475662:502669502669503652984Geobacillus sp. Y4.1MC1 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase1e-48193
NC_016885:1153277:117191011719101172824915Pyrobaculum oguniense TE7 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase7e-43174
NC_012632:638347:656645656645657592948Sulfolobus islandicus M.16.27 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase4e-42172
NC_012588:620353:638651638651639598948Sulfolobus islandicus M.14.25 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase3e-42172
NC_012726:641763:660381660381661328948Sulfolobus islandicus M.16.4 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase3e-42172
NC_017275:594951:613328613328614275948Sulfolobus islandicus HVE10/4 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase1e-41170
NC_017276:675229:676701676701677648948Sulfolobus islandicus REY15A chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase1e-41170
NC_012623:1631985:164739216473921648339948Sulfolobus islandicus Y.N.15.51 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase6e-41168
NC_012622:940990:942462942462943409948Sulfolobus islandicus Y.G.57.14 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase6e-41168
NC_012589:842270:843742843742844689948Sulfolobus islandicus L.S.2.15, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase6e-41168
NC_008705:2763131:278752127875212788390870Mycobacterium sp. KMS, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase7e-34144
NC_008146:2744612:276963327696332770502870Mycobacterium sp. MCS, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase HpaD7e-34144
NC_021171:2019755:203625020362502037164915Bacillus sp. 1NLA3E, complete genomecatechol 2,3 dioxygenase4e-31135
NC_014974:1076565:109546210954621096436975Thermus scotoductus SA-01 chromosome, complete genomecatechol 2,3 dioxygenase2e-30132
NC_016147:730810:742222742222743166945Pseudoxanthomonas spadix BD-a59 chromosome, complete genomecatechol 2,3 dioxygenase1e-29130
NC_014974:1076565:1082784108278410837881005Thermus scotoductus SA-01 chromosome, complete genomecatechol 2,3 dioxygenase5e-28125
NC_014831:2133060:2143087214308721440941008Thermaerobacter marianensis DSM 12885 chromosome, complete genomecatechol 2,3 dioxygenase1e-27124
NC_008702:2039462:204118420411842042116933Azoarcus sp. BH72, complete genomeprobable Catechol 2,3-dioxygenase2e-26120
NC_018697:505915:516478516478517398921Cycloclasticus sp. P1 chromosome, complete genomeCatechol 2,3 dioxygenase, XylE9e-27120
NC_007973:1411714:143766914376691438613945Ralstonia metallidurans CH34 chromosome 1, complete sequenceGlyoxalase/bleomycin resistance protein/dioxygenase3e-26119
NC_016147:1788219:180071218007121801656945Pseudoxanthomonas spadix BD-a59 chromosome, complete genomecatechol 2,3-dioxygenase6e-26118
NC_014206:2971304:298556329855632986534972Geobacillus sp. C56-T3 chromosome, complete genomecatechol 2,3 dioxygenase9e-26117
NC_011666:1572487:159318215931821594102921Methylocella silvestris BL2, complete genomecatechol 2,3 dioxygenase9e-26117
NC_016582:10287865:103040741030407410304766693Streptomyces bingchenggensis BCW-1 chromosome, complete genome3,4-dihydroxyphenylacetate 2,3-dioxygenase2e-24113
NC_012522:5847699:5859095585909558601801086Rhodococcus opacus B4, complete genomeputative catechol 2,3-dioxygenase2e-24113
NC_013730:4811911:483133248313324832291960Spirosoma linguale DSM 74, complete genomeCatechol 2,3-dioxygenase4e-24112
NC_017506:1100679:113707611370761137948873Marinobacter adhaerens HP15 chromosome, complete genomecatechol 2,3-dioxygenase8e-22104
NC_011961:891815:913237913237914136900Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequencecatechol 2,3-dioxygenase9e-22104
NC_015514:3351052:3354194335419433552191026Cellulomonas fimi ATCC 484 chromosome, complete genomeBiphenyl-2,3-diol 1,2-dioxygenase5e-21102
NC_008148:2231045:2253126225312622541601035Rubrobacter xylanophilus DSM 9941, complete genomeCatechol 2,3-dioxygenase3e-2099.8
NC_011961:304158:313789313789314685897Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequencecatechol 2,3-dioxygenase9e-1994.7
NC_002754:1061851:1062806106280610638131008Sulfolobus solfataricus P2, complete genomeCatechol 2,3-dioxygenase (metapyrocatechase)3e-1686.3
NC_012726:346539:3519503519503529571008Sulfolobus islandicus M.16.4 chromosome, complete genomecatechol 2,3 dioxygenase4e-1685.5
NC_013769:316789:3407663407663417731008Sulfolobus islandicus L.D.8.5 chromosome, complete genomecatechol 2,3-dioxygenase5e-1685.1
NC_012589:347020:3524223524223534291008Sulfolobus islandicus L.S.2.15, complete genomecatechol 2,3 dioxygenase1e-1584.3
NC_017275:377800:3825393825393835461008Sulfolobus islandicus HVE10/4 chromosome, complete genomecatechol 2,3 dioxygenase1e-1584
NC_017276:337286:3428503428503438571008Sulfolobus islandicus REY15A chromosome, complete genomecatechol 2,3 dioxygenase1e-1584
NC_008391:1210451:123441912344191235354936Burkholderia cepacia AMMD chromosome 2, complete sequenceGlyoxalase/bleomycin resistance protein/dioxygenase1e-1274.3
NC_015957:196000:214414214414215349936Streptomyces violaceusniger Tu 4113 chromosome, complete genomeGlyoxalase/bleomycin resistance protein/dioxygenase2e-1273.6
NC_009077:4419084:444511844451184446098981Mycobacterium sp. JLS, complete genomeGlyoxalase/bleomycin resistance protein/dioxygenase5e-1272
NC_012982:2772976:279412527941252795051927Hirschia baltica ATCC 49814, complete genomeGlyoxalase/bleomycin resistance protein/dioxygenase2e-1170.1
NC_017904:1725180:173459417345941735562969Mycobacterium sp. MOTT36Y chromosome, complete genomeglyoxalase/bleomycin resistance protein/dioxygenase3e-1169.3
NC_018691:1322389:1322389132238913234621074Alcanivorax dieselolei B5 chromosome, complete genomeGlyoxalase family protein5e-0962.4
NC_016947:1480282:148880214888021489728927Mycobacterium intracellulare MOTT-02 chromosome, complete genomeglyoxalase/bleomycin resistance protein/dioxygenase1e-0861.2
NC_007347:1215358:122718912271891228172984Ralstonia eutropha JMP134 chromosome 1, complete sequenceCatechol 2,3-dioxygenase2e-0859.7
NC_015957:5082172:509665750966575097580924Streptomyces violaceusniger Tu 4113 chromosome, complete genomeGlyoxalase/bleomycin resistance protein/dioxygenase6e-0755.1
NC_009921:4399000:442392944239294424390462Frankia sp. EAN1pec, complete genomeGlyoxalase/bleomycin resistance protein/dioxygenase3e-0652.8
NC_016582:2069677:206879620687962069680885Streptomyces bingchenggensis BCW-1 chromosome, complete genomeglyoxalase/bleomycin resistance protein/dioxygenase6e-0652
NC_008726:4725389:473623247362324737128897Mycobacterium vanbaalenii PYR-1, complete genomeGlyoxalase/bleomycin resistance protein/dioxygenase7e-0651.6
NC_017033:1939507:194101019410101941978969Frateuria aurantia DSM 6220 chromosome, complete genomeputative ring-cleavage extradiol dioxygenase7e-0651.6