Pre_GI: BLASTP Hits

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Query: NC_011961:891815:897928 Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequence

Start: 897928, End: 898926, Length: 999

Host Lineage: Thermomicrobium roseum; Thermomicrobium; Thermomicrobiaceae; Thermomicrobiales; Chloroflexi; Bacteria

General Information: Thermomicrobium roseum DSM 5159 was isolated from Yellowstone National Park, USA. Obligate thermophile with unusual cell wall structure. Thermomicrobium roseum is a red-pigmented, rod-shaped, Gram-negative extreme thermophile that possesses both an atypical cell wall composition and an unusual cell membrane that is composed entirely of long-chain 1,2-diols. Analyses of environmental sequences from hot spring environments show that T.roseum displays a low quantity but ubiquitous presence in top layers of microbial mats. Few standard housekeeping genes are found on the megaplasmid, however, it does encode a complete system for chemotaxis including both chemosensory components and an entire flagellar apparatus. T. roseum oxidizes CO aerobically, making it the first thermophile known to do so. In addition, is is propose that glycosylation of its carotenoids plays a crucial role in the adaptation of the cell membrane to this bacterium's thermophilic lifestyle. Because T. roseum is a deep-branching member of this phylum, eventhough this species is not photosynthetic, analysis of the genome provides some insight into the origins of photosynthesis in the Chloroflexi.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011961:304158:3296663296663306941029Thermomicrobium roseum DSM 5159 plasmid unnamed, complete sequencealdolase2e-96352
NC_008146:1748026:176656217665621767560999Mycobacterium sp. MCS, complete genomedihydrodipicolinate synthetase1e-65250
NC_009077:1687304:170487817048781705876999Mycobacterium sp. JLS, complete genomedihydrodipicolinate synthetase1e-65250
NC_014814:132404:149193149193150191999Mycobacterium sp. Spyr1 chromosome, complete genomedihydrodipicolinate synthase/N-acetylneuraminate lyase1e-65250
NC_008705:1752180:177071517707151771713999Mycobacterium sp. KMS, complete genomedihydrodipicolinate synthetase1e-65250
NC_009338:603663:615243615243616241999Mycobacterium gilvum PYR-GCK chromosome, complete genomedihydrodipicolinate synthetase2e-64246
NC_009338:686932:696743696743697741999Mycobacterium gilvum PYR-GCK chromosome, complete genomedihydrodipicolinate synthetase2e-64246
NC_008726:494769:511503511503512501999Mycobacterium vanbaalenii PYR-1, complete genomedihydrodipicolinate synthetase1e-64246
NC_016604:3137694:3157545315754531585491005Mycobacterium rhodesiae NBB3 chromosome, complete genomedihydrodipicolinate synthase/N-acetylneuraminate lyase3e-64245
NC_015563:1951368:196571419657141966676963Delftia sp. Cs1-4 chromosome, complete genomedihydrodipicolinate synthetase2e-62239
NC_009077:4419084:444037644403764441347972Mycobacterium sp. JLS, complete genomedihydrodipicolinate synthetase1e-60233
NC_016947:1480282:149329414932941494265972Mycobacterium intracellulare MOTT-02 chromosome, complete genomedihydrodipicolinate synthetase4e-59228
NC_015554:4002952:401066540106654011660996Alteromonas sp. SN2 chromosome, complete genomeDihydrodipicolinate synthetase1e-58227
NC_008781:2611702:2617087261708726181241038Polaromonas naphthalenivorans CJ2, complete genomedihydrodipicolinate synthetase4e-56218
NC_015563:1951368:198122419812241982222999Delftia sp. Cs1-4 chromosome, complete genomedihydrodipicolinate synthetase2e-49196
NC_009338:686932:6942096942096952341026Mycobacterium gilvum PYR-GCK chromosome, complete genomedihydrodipicolinate synthetase2e-36153
NC_009338:603663:6127096127096137341026Mycobacterium gilvum PYR-GCK chromosome, complete genomedihydrodipicolinate synthetase2e-36153
NC_014814:132404:1517001517001527581059Mycobacterium sp. Spyr1 chromosome, complete genomedihydrodipicolinate synthase/N-acetylneuraminate lyase3e-36152
NC_008726:494769:5140115140115150361026Mycobacterium vanbaalenii PYR-1, complete genomedihydrodipicolinate synthetase8e-36151
NC_016604:3137694:3160058316005831611341077Mycobacterium rhodesiae NBB3 chromosome, complete genomedihydrodipicolinate synthase/N-acetylneuraminate lyase9e-36150
NC_009077:1687304:170744317074431708411969Mycobacterium sp. JLS, complete genomedihydrodipicolinate synthetase4e-34145
NC_008146:1748026:176912717691271770095969Mycobacterium sp. MCS, complete genomedihydrodipicolinate synthetase4e-34145
NC_008705:1752180:177328017732801774248969Mycobacterium sp. KMS, complete genomedihydrodipicolinate synthetase4e-34145
NC_020291:6426704:643244164324416433307867Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomedihydrodipicolinate synthase 22e-1066.6
NC_014935:918855:923888923888924784897Nitratifractor saLSUginis DSM 16511 chromosome, complete genomedihydrodipicolinate synthase2e-0963.5
CP002797:4603787:461116546111654611986822Escherichia coli NA114, complete genomeHypothetical protein2e-0963.2
NC_007644:626992:654714654714655658945Moorella thermoacetica ATCC 39073, complete genomeDihydrodipicolinate synthetase3e-0962.8
NC_013889:413909:432159432159433037879Thioalkalivibrio sp. K90mix chromosome, complete genomedihydrodipicolinate synthase5e-0962.4
NC_009715:905134:923221923221924114894Campylobacter curvus 525.92 chromosome, complete genomedihydrodipicolinate synthase1e-0861.2
NC_016830:1645879:164836616483661649244879Pseudomonas fluorescens F113 chromosome, complete genomedihydrodipicolinate synthase1e-0860.8
NC_015389:1782825:180457818045781805474897Coriobacterium glomerans PW2 chromosome, complete genomedihydrodipicolinate synthetase2e-0860.5
NC_014500:4049384:406976940697694070653885Dickeya dadantii 3937 chromosome, complete genomedihydrodipicolinate synthase2e-0860.1
NC_015318:249445:270509270509271387879Hippea maritima DSM 10411 chromosome, complete genomedihydrodipicolinate synthase3e-0859.7
NC_014166:1008266:101307710130771013976900Arcobacter nitrofigilis DSM 7299 chromosome, complete genomedihydrodipicolinate synthase3e-0859.7
NC_013943:2610902:262311226231122623984873Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomedihydrodipicolinate synthase3e-0859.7
NC_013939:212331:217959217959218840882Deferribacter desulfuricans SSM1, complete genomedihydrodipicolinate synthase4e-0859.3
NC_015573:2463123:250941225094122510296885Desulfotomaculum kuznetsovii DSM 6115 chromosome, complete genomeDihydrodipicolinate synthase9e-0858.2
NC_014206:1618988:163353416335341634466933Geobacillus sp. C56-T3 chromosome, complete genomedihydrodipicolinate synthetase8e-0858.2
NC_013851:2729000:273402927340292734904876Allochromatium vinosum DSM 180 chromosome, complete genomedihydrodipicolinate synthase1e-0757.8
NC_006510:1995916:200440720044072005309903Geobacillus kaustophilus HTA426, complete genomedihydrodipicolinate synthase2e-0757
NC_016613:2596464:259754425975442598428885Vibrio sp. EJY3 chromosome 1, complete sequencedihydrodipicolinate synthase2e-0757
NC_009714:534015:534015534015534911897Campylobacter hominis ATCC BAA-381, complete genomedihydrodipicolinate synthase3e-0756.2
NC_014836:33278:492984929850179882Desulfurispirillum indicum S5 chromosome, complete genomedihydrodipicolinate synthase4e-0756.2
NC_015953:5444572:545150554515055452404900Streptomyces sp. SirexAA-E chromosome, complete genomedihydrodipicolinate synthase4e-0755.8
NC_012590:637651:659464659464660408945Corynebacterium aurimucosum ATCC 700975, complete genomedihydrodipicolinate synthase4e-0755.8
NC_014926:165312:167716167716168588873Thermovibrio ammonificans HB-1 chromosome, complete genomedihydrodipicolinate synthase5e-0755.5
NC_012779:2064582:207126820712682072152885Edwardsiella ictaluri 93-146, complete genomehypothetical protein7e-0755.1
NC_016512:679688:697399697399698280882Propionibacterium acnes TypeIA2 P.acn17 chromosome, completedihydrodipicolinate synthase8e-0755.1
NC_016511:678582:698014698014698895882Propionibacterium acnes TypeIA2 P.acn31 chromosome, completedihydrodipicolinate synthase8e-0755.1
NC_014039:708427:724720724720725601882Propionibacterium acnes SK137 chromosome, complete genomedihydrodipicolinate synthase8e-0755.1
NC_014837:809911:827734827734828618885Pantoea sp. At-9b chromosome, complete genomedihydrodipicolinate synthetase2e-0653.9
NC_002937:1915787:193342419334241934302879Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completedihydrodipicolinate synthase1e-0653.9
NC_014364:815346:822080822080822961882Spirochaeta smaragdinae DSM 11293 chromosome, complete genomedihydrodipicolinate synthetase2e-0653.5
NC_018750:5828000:583719358371935838101909Streptomyces venezuelae ATCC 10712, complete genomeDihydrodipicolinate synthase3e-0653.1
NC_014650:475662:504762504762505679918Geobacillus sp. Y4.1MC1 chromosome, complete genome2,4-dihydroxyhept-2-ene-1,7-dioic acid aldolase3e-0652.8
NC_019978:686362:699447699447700325879Halobacteroides halobius DSM 5150, complete genomedihydrodipicolinate synthase8e-0651.6
NC_010804:2206000:222802922280292228934906Burkholderia multivorans ATCC 17616 chromosome 1, completedihydrodipicolinate synthase8e-0651.6
NC_002677:1822500:182462718246271825529903Mycobacterium leprae TN, complete genomedihydrodipicolinate synthase8e-0651.6
NC_020409:560278:569967569967570848882Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeDihydrodipicolinate synthase8e-0651.6