Pre_GI: BLASTP Hits

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Query: NC_011770:2499432:2504266 Pseudomonas aeruginosa LESB58, complete genome

Start: 2504266, End: 2504342, Length: 77

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018080:2288700:22960692296069229614577Pseudomonas aeruginosa DK2 chromosome, complete genometRNA-Pro1e-0652
NC_008027:2051821:20549462054946205502277Pseudomonas entomophila L48, complete genometRNA-Pro1e-0652
NC_009512:3618055:36308103630810363088677Pseudomonas putida F1, complete genometRNA-Pro1e-0652
NC_009434:2577717:25841802584180258425677Pseudomonas stutzeri A1501, complete genometRNA-Pro1e-0652
NC_015740:2407500:24412652441265244134177Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, completetRNA-Pro1e-0652
NC_007645:4677965:46916684691668469174477Hahella chejuensis KCTC 2396, complete genometRNA-Pro3e-0650.4
NC_008463:2467219:24745882474588247466174Pseudomonas aeruginosa UCBPP-PA14, complete genometRNA-Pro7e-0649.3
NC_021150:2026496:20417372041737204181074Azotobacter vinelandii CA6, complete genometRNA-Pro7e-0649.3
NC_002947:2809591:28170012817001281707474Pseudomonas putida KT2440, complete genometRNA-Pro7e-0649.3
NC_015410:3209954:32210203221020322109374Pseudomonas mendocina NK-01 chromosome, complete genometRNA-Pro7e-0649.3
NC_007492:2203220:22078402207840220791677Pseudomonas fluorescens PfO-1, complete genometRNA-Pro7e-0649.3
NC_004129:2328491:23382962338296233837277Pseudomonas fluorescens Pf-5, complete genometRNA-Pro7e-0649.3
NC_012560:2026483:20417242041724204179774Azotobacter vinelandii DJ, complete genometRNA-Pro7e-0649.3