Pre_GI: BLASTP Hits

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Query: NC_011770:1431740:1446952 Pseudomonas aeruginosa LESB58, complete genome

Start: 1446952, End: 1447656, Length: 705

Host Lineage: Pseudomonas aeruginosa; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas aeruginosa LESB58 is a member of the Liverpool epidemic strains (LES) first isolated at the Liverpool Cystic Fibrosis (CF) clinic center. These isolates are highly virulent and readily transfered between CF patients and to non-CF individuals. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. This organism is an opportunistic human pathogen. While it rarely infects healthy individuals, immunocompromised patients, like burn victims, AIDS-, cancer- or cystic fibrosis-patients are at increased risk for infection with this environmentally versatile bacteria. It is an important soil bacterium with a complex metabolism capable of degrading polycyclic aromatic hydrocarbons, and producing interesting, biologically active secondary metabolites including quinolones, rhamnolipids, lectins, hydrogen cyanide, and phenazines. Production of these products is likely controlled by complex regulatory networks making Pseudomonas aeruginosa adaptable both to free-living and pathogenic lifestyles. The bacterium is naturally resistant to many antibiotics and disinfectants, which makes it a difficult pathogen to treat.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009937:958576:972170972170972916747Azorhizobium caulinodans ORS 571, complete genomeputative antirepressor protein7e-35147
NC_017059:1972895:199250819925081993311804Rhodospirillum photometricum DSM 122, complete genomeUncharacterized phage-encoded protein-like3e-31135
NC_009783:1956000:196037119603711961039669Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein1e-27122
NC_016816:2953530:296618529661852966979795Pantoea ananatis LMG 5342, complete genomeputative bacteriophage antirepressor9e-25113
NC_007712:1219957:123035312303531231102750Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein3e-22105
NC_012808:4877703:488322948832294883759531Methylobacterium extorquens AM1, complete genomehypothetical protein9e-22103
NC_009053:553298:568967568967569662696Actinobacillus pleuropneumoniae L20, complete genomehypothetical protein5e-21101
NC_005966:2110549:212319821231982123923726Acinetobacter sp. ADP1, complete genomeputative DNA-binding protein (Roi)1e-20100
NC_008258:269806:293814293814294536723Shigella flexneri 5 str. 8401, complete genomeputative DNA-binding protein Roi of bacteriophage BP-933W2e-1995.9
NC_017328:303987:322722322722323444723Shigella flexneri 2002017 chromosome, complete genomeDNA-binding protein Roi5e-1994.7
NC_010002:3509506:353682335368233537536714Delftia acidovorans SPH-1, complete genomehypothetical protein4e-1994.7
NC_009255:1369200:138016213801621380944783Burkholderia vietnamiensis G4 chromosome 2, complete sequenceKilA domain-containing protein6e-1994.4
NC_011601:1039500:105684210568421057564723Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeDNA-binding protein2e-1892.8
NC_009778:959982:982338982338983075738Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein5e-1788.2
NC_013282:1804909:182067518206751821400726Cronobacter turicensis, complete genomehypothetical protein9e-1787
NC_015566:3659318:366059336605933661267675Serratia sp. AS12 chromosome, complete genomePhage regulatory protein, Rha-like protein3e-1685.5
NC_007712:1516589:152579515257951526622828Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein4e-1581.6
NC_016642:757964:768809768809769561753Pseudovibrio sp. FO-BEG1 chromosome, complete genomePhage antirepressor protein domain-containing protein5e-1581.3
NC_014323:3292082:330281233028123303363552Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein7e-1477.4
NC_013282:1200993:122664412266441227345702Cronobacter turicensis, complete genomehypothetical protein1e-1377
NC_009778:2993218:300358730035873004291705Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein1e-1273.6
NC_007712:3382000:339622233962223396974753Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein2e-1272.8
NC_002655:1332961:134955513495551350283729Escherichia coli O157:H7 EDL933, complete genomeputative DNA-binding protein Roi of bacteriophage BP-933W3e-1272
NC_013364:1183000:120081812008181201540723Escherichia coli O111:H- str. 11128, complete genomeputative DNA-binding protein3e-1272
NC_013446:3034486:304048930404893041223735Comamonas testosteroni CNB-2, complete genomepossible bacteriophage antirepressor5e-1271.2
NC_011757:4293000:431037243103724310659288Methylobacterium chloromethanicum CM4, complete genome2e-1169.3
NC_013361:3867558:389952638995263900254729Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-1169.3
NC_013361:1558423:157703215770321577754723Escherichia coli O26:H11 str. 11368 chromosome, complete genomeDNA-binding protein4e-1168.2
NC_011283:785973:795820795820796512693Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein4e-1168.2
NC_010511:7024412:703517270351727035438267Methylobacterium sp. 4-46 chromosome, complete genomeanti-repressor protein4e-1168.2
NC_017047:1906000:191134119113411912000660Rahnella aquatilis HX2 chromosome, complete genomephage antirepressor protein7e-1167.4
NC_004631:3030580:304203030420303042749720Salmonella enterica subsp. enterica serovar Typhi Ty2, completehypothetical protein1e-0963.5
NC_016832:3020000:303067030306703031389720Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Phage regulatory protein, Rha-like protein1e-0963.5
NC_013364:3312379:333186433318643332343480Escherichia coli O111:H- str. 11128, complete genome9e-0960.5
NC_013174:2455420:246188524618852462655771Jonesia denitrificans DSM 20603, complete genomephage antirepressor protein1e-0757
NC_006087:2439252:245342124534212454203783Leifsonia xyli subsp. xyli str. CTCB07, complete genomeprophage antirepressor protein2e-0756.2
NC_006087:345976:403622403622403984363Leifsonia xyli subsp. xyli str. CTCB07, complete genomehypothetical protein7e-0754.3
NC_007519:2773000:279055527905552791169615Desulfovibrio alaskensis G20 chromosome, complete genomephage-encoded protein-like8e-0753.9
NC_013199:845000:847885847885848589705Lactobacillus rhamnosus Lc 705, complete genomephage protein, antirepressor protein1e-0653.1
NC_006322:1415863:142817314281731428907735Bacillus licheniformis ATCC 14580, complete genomehypothetical protein3e-0652
NC_006270:1415001:142731014273101428044735Bacillus licheniformis ATCC 14580, complete genomephage related protein3e-0652