Pre_GI: BLASTP Hits

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Query: NC_011749:34056:53308 Escherichia coli UMN026 plasmid p1ESCUM, complete sequence

Start: 53308, End: 53517, Length: 210

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Isolated from a woman with uncomplicated acute cystitis in 1999 in the USA. This strain is drug resistant. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017319:192482:207702207702207911210Shigella flexneri 2002017 plasmid pSFxv_1, complete sequenceputative regulator2e-33141
NC_007608:97092:110679110679110888210Shigella boydii Sb227 plasmid pSB4_227, complete sequenceputative regulator2e-33141
NC_010660:175200:190710190710190916207Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequencehypothetical protein1e-31135
NC_007607:87000:104623104623104811189Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceputative regulator2e-2097.4
NC_013716:5201097:523261552326155232827213Citrobacter rodentium ICC168, complete genomeputative haemolysin expression regulatory protein1e-1788.6
NC_015663:1869000:188221118822111882414204Enterobacter aerogenes KCTC 2190 chromosome, complete genomegene expression modulator1e-1685.5
NC_012880:1127997:115129411512941151497204Dickeya dadantii Ech703, complete genomeHemolysin expression modulating family protein7e-1682.8
NC_015567:1127780:115196511519651152168204Serratia sp. AS9 chromosome, complete genomehemolysin expression modulating family protein2e-1581.3
NC_015566:1127595:115178011517801151983204Serratia sp. AS12 chromosome, complete genomehemolysin expression modulating family protein2e-1581.3
NC_004344:589375:607573607573607776204Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein2e-1580.9
NC_004431:3409389:348569434856943485918225Escherichia coli CFT073, complete genomeHaemolysin expression modulating protein6e-1579.7
NC_016893:218376:224256224256224459204Wigglesworthia glossinidia endosymbiont of Glossina morsitanshemolysin expression modulating protein8e-1579
NC_007713:1:228222822494213Sodalis glossinidius str. 'morsitans' plasmid pSG1, completeputative regulatory protein7e-1165.9
NC_011751:3453683:350879835087983508938141Escherichia coli UMN026 chromosome, complete genome6e-0959.3
NC_004431:279868:285015285015285155141Escherichia coli CFT073, complete genomeHaemolysin expression modulating protein1e-0858.5
NC_015566:3269469:327287432728743273089216Serratia sp. AS12 chromosome, complete genomehemolysin expression modulating family protein8e-0752.4
NC_013941:3676146:370684037068403707028189Escherichia coli O55:H7 str. CB9615 chromosome, complete genomehypothetical protein8e-0649.3
NC_013353:3627355:365865536586553658843189Escherichia coli O103:H2 str. 12009, complete genomeregulator Hha-homolog8e-0649.3
AP010958:3627355:365865536586553658843189Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative regulator Hha-homolog8e-0649.3