Pre_GI: BLASTP Hits

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Query: NC_011742:4873351:4877836 Escherichia coli S88 chromosome, complete genome

Start: 4877836, End: 4878852, Length: 1017

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli S88 is a serotype O45:K1 strain isolated from a case of neonatal meningitis. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011751:5070597:5073175507317550741911017Escherichia coli UMN026 chromosome, complete genomeputative frameshift suppressor; KpLE2 phage-like element0701
NC_000913:4528278:4533038453303845340541017Escherichia coli K12, complete genomeKpLE2 phage-like element; predicted frameshift suppressor0701
AC_000091:4534935:4539695453969545407111017Escherichia coli W3110 DNA, complete genomepredicted frameshift suppressor0701
CP002797:4656327:4664493466449346655361044Escherichia coli NA114, complete genomePutative phospholipase D0687
NC_015224:610807:6146146146146164041791Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative superfamily I DNA helicase6e-147520
NC_010102:4745949:4750883475088347543983516Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein4e-132471
NC_015761:4355335:4360324436032443638393516Salmonella bongori NCTC 12419, complete genomehypothetical protein4e-132471
NC_011750:4775770:4796684479668448002113528Escherichia coli IAI39 chromosome, complete genomeputative superfamily I DNA helicase1e-131469
NC_004741:3041294:3046628304662830501433516Shigella flexneri 2a str. 2457T, complete genomeputative superfamily I DNA helicase2e-131468
NC_004337:3049118:3054452305445230579673516Shigella flexneri 2a str. 301, complete genomeputative superfamily I DNA helicase2e-131468
NC_017328:3088907:3094241309424130977563516Shigella flexneri 2002017 chromosome, complete genomeputative superfamily I DNA helicase2e-131468
NC_011748:4792703:4802695480269548062103516Escherichia coli 55989, complete genomePutative superfamily I DNA helicase2e-131468
CU928145:4792703:4802695480269548062103516Escherichia coli 55989 chromosome, complete genomePutative superfamily I DNA helicase2e-131468
NC_016822:3420826:3422873342287334263883516Shigella sonnei 53G, complete genomesuperfamily I DNA helicase7e-131467
NC_007384:3383983:3396289339628933998043516Shigella sonnei Ss046, complete genomeputative superfamily I DNA helicases8e-131466
NC_009792:3225965:3236534323653432400493516Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-130466
NC_008253:4735418:4737132473713247406473516Escherichia coli 536, complete genomeputative superfamily I DNA helicases6e-130464
NC_007946:4779745:4780097478009747836123516Escherichia coli UTI89, complete genomeputative DNA helicase, superfamily I2e-129462
NC_004556:1641985:1660432166043216640043573Xylella fastidiosa Temecula1, complete genomeDNA helicase1e-86320
NC_009665:2352528:2354452235445223579883537Shewanella baltica OS185 chromosome, complete genomephospholipase D/transphosphatidylase6e-84310
NC_015690:7785875:7838600783860078420193420Paenibacillus mucilaginosus KNP414 chromosome, complete genomeDNA helicase7e-50197
NC_008741:81914:8897988979925093531Desulfovibrio vulgaris subsp. vulgaris DP4 plasmid pDVUL01,hypothetical protein2e-41169
NC_011283:4966471:497770449777044978009306Klebsiella pneumoniae 342 chromosome, complete genomephospholipase D1e-34147
NC_019897:938921:9616169616169645642949Thermobacillus composti KWC4 chromosome, complete genomehypothetical protein2e-27123
NC_016845:575123:595451595451595678228Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,phospholipase D2e-27123
NC_011830:693555:702221702221702907687Desulfitobacterium hafniense DCB-2, complete genome3e-25115
NC_014393:1022843:1022843102284310257462904Clostridium cellulovorans 743B chromosome, complete genomeputative DNA helicase3e-24112
NC_021064:793098:7930987930987949511854Propionibacterium avidum 44067, complete genomehypothetical protein1e-1894
NC_016818:4215836:4215836421583642194473612Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completehypothetical protein2e-1790.5
NC_014117:442616:4773064773064823605055Burkholderia sp. CCGE1002 chromosome chromosome 1, completeTOPRIM domain protein2e-1686.7
NC_007950:109399:1114871114871154944008Polaromonas sp. JS666 plasmid 2, complete sequenceDNA topoisomerase7e-1271.6
NC_015385:2135456:2135456213545621384913036Treponema succinifaciens DSM 2489 chromosome, complete genomehypothetical protein1e-1067.8
NC_014815:4491413:4498725449872545019703246Micromonospora sp. L5 chromosome, complete genomephospholipase d/transphosphatidylase7e-1065.1
NC_013961:441719:4698664698664732313366Erwinia amylovora, complete genomeprobable helicase senataxin9e-0858.2
NC_013971:3296272:3298069329806933014343366Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein9e-0858.2
NC_015167:2498666:2505107250510725084333327Cellulophaga lytica DSM 7489 chromosome, complete genomeserine/threonine protein kinase3e-0756.6
NC_013928:395028:3950283950283980333006Streptococcus mutans NN2025, complete genomehypothetical protein3e-0756.2
NC_016887:1949927:1957259195725919609063648Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein3e-0756.2
NC_014640:2693060:2701831270183127035911761Achromobacter xylosoxidans A8 chromosome, complete genomesuperfamily I DNA and RNA helicases and helicase subunits-like protein6e-0755.5
NC_013450:45782:4578245782489343153Staphylococcus aureus subsp. aureus ED98, complete genomehypothetical protein6e-0755.5
NC_012214:474359:4864154864154897533339Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein5e-0755.5
NC_015277:3351504:3356971335697133588631893Sphingobacterium sp. 21 chromosome, complete genomeAAA ATPase5e-0755.5
NC_013947:3080290:3088272308827230918623591Stackebrandtia nassauensis DSM 44728 chromosome, complete genomepeptidase C14 caspase catalytic subunit p205e-0755.5
NC_017063:775337:7864377864377882481812Helicobacter pylori ELS37 chromosome, complete genomeregulator of nonsense transcripts 16e-0755.1
NC_009464:650997:6687456687456719123168Uncultured methanogenic archaeon RC-I, complete genomehypothetical protein1e-0654.7
NC_008698:903759:9088359088359107241890Thermofilum pendens Hrk 5, complete genomeAAA ATPase1e-0654.3
NC_015311:403281:4032814032814066613381Prevotella denticola F0289 chromosome, complete genomehypothetical protein2e-0653.9
NC_015311:403281:4078594078594097781920Prevotella denticola F0289 chromosome, complete genomehypothetical protein2e-0653.5
NC_013235:1218378:1233313123331312389165604Nakamurella multipartita DSM 44233, complete genomeputative superfamily I DNA and RNA helicase protein4e-0652.8
NC_012654:237175:2407082407082438603153Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequenceprotein kinase domain protein6e-0652
NC_012731:600518:6093686093686143234956Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein9e-0651.2