Pre_GI: BLASTP Hits

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Query: NC_011593:1163000:1175973 Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,

Start: 1175973, End: 1176353, Length: 381

Host Lineage: Bifidobacterium longum; Bifidobacterium; Bifidobacteriaceae; Bifidobacteriales; Actinobacteria; Bacteria

General Information: This strain was isolated from human infant feces. Representatives of this genus naturally colonize the human gastrointestinal tract (GIT) and are important for establishing and maintaining homeostasis of the intestinal ecosystem to allow for normal digestion. Their presence has been associated with beneficial health effects, such as prevention of diarrhea, amelioration of lactose intolerance, or immunomodulation. The stabilizing effect on GIT microflora is attributed to the capacity of bifidobacteria to produce bacteriocins, which are bacteriostatic agents with a broad spectrum of action, and to their pH-reducing activity. Most of the ~30 known species of bifidobacteria have been isolated from the mammalian GIT, and some from the vaginal and oral cavity. All are obligate anaerobes belonging to the Actinomycetales, branch of Gram-positive bacteria with high GC content that also includes Corynebacteria, Mycobacteria, and Streptomycetes. Bifidobacterium longum is found in adult humans and formula fed infants as a normal component of gut flora.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009089:3935500:396323639632363963619384Clostridium difficile 630, complete genomeconjugative transposon protein2e-34144
NC_017219:1163000:117599511759951176144150Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein2e-22103
NC_009089:428075:452608452608452997390Clostridium difficile 630, complete genomeconjugative transposon protein3e-22103
NC_017179:4023139:402994340299434030326384Clostridium difficile BI1, complete genomeconjugative transposon protein5e-2199.8
NC_015977:2966971:298340629834062983789384Roseburia hominis A2-183 chromosome, complete genomeconjugative transposon protein2e-2097.8
NC_013895:1332832:136865113686511369037387Clostridiales genomosp. BVAB3 str. UPII9-5 chromosome, completehypothetical protein2e-1787.4
NC_009089:581655:586031586031586417387Clostridium difficile 630, complete genomeconjugative transposon protein2e-1787.4
NC_016630:1247251:126400612640061264389384Filifactor alocis ATCC 35896 chromosome, complete genomehypothetical protein2e-1684.7
NC_009089:3889811:390957939095793909956378Clostridium difficile 630, complete genomeconjugative transposon conserved hypothetical protein1e-1582
NC_004668:2198027:226595722659572266328372Enterococcus faecalis V583, complete genomehypothetical protein4e-1270.1