Pre_GI: BLASTP Hits

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Query: NC_011369:1135592:1173664 Rhizobium leguminosarum bv. trifolii WSM2304 chromosome, complete

Start: 1173664, End: 1174563, Length: 900

Host Lineage: Rhizobium leguminosarum; Rhizobium; Rhizobiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: Nitrogen-fixing plant symbiont. This biovar is a symbiont of clover plants and is important commercially as it is used in the agricultural industry. Strain WSM1325 is compatible with many perennial clovers of American and African origin used in farming, and is therefore one of the most important clover inoculants but is incompatible with Mediterranean perennial clovers, such as those nodulated by the dissimilar strain WSM1325. This organism, like other Rhizobia, establishes a symbiotic relationship with a legume plant, providing nitrogen in exchange for a protected environment. The legume roots secrete flavonoids and isoflavonoids which the bacteria recognize and use to turn on genes involved in root nodulation. Many of the root nodulation genes are involved in synthesis and secretion of a nodule inducing signal, a lipochito-oligosaccharide molecule, which the plant recognizes, triggering nodule formation. The bacterium is endocytosed and exists inside a membrane bound organelle, the symbiosome, and fixes nitrogen for the plant cell while the host cell provides carbon compounds for the bacterium to grow on. The nitrogen fixation is important as it obviates the need for expensive and environmentally damaging fertilizer use.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014121:489500:510128510128511111984Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein7e-57221
NC_012779:346998:3654063654063664611056Edwardsiella ictaluri 93-146, complete genomeDNA primase TraC2e-56219
NC_010102:4557037:456908345690834570075993Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein6e-56218
NC_010554:2789722:279871827987182799692975Proteus mirabilis HI4320, complete genomeDNA primase9e-56217
NC_016626:1751159:175916617591661760056891Burkholderia sp. YI23 plasmid byi_1p, complete sequenceantirestriction protein2e-55216
NC_014923:5721686:572404357240435725005963Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, completedomain of unknown function DUF17383e-55215
NC_019973:5650646:565300356530035653965963Mesorhizobium australicum WSM2073, complete genomeantirestriction protein3e-55215
NC_015675:6276357:627871462787146279676963Mesorhizobium opportunistum WSM2075 chromosome, complete genomehypothetical protein3e-55215
NC_009832:4482500:4497973449797344989831011Serratia proteamaculans 568, complete genomedomain of unknown function DUF17388e-55214
NC_016816:4129299:417370041737004174680981Pantoea ananatis LMG 5342, complete genomeantirestriction protein ArdC1e-54213
NC_015259:485015:504960504960505904945Polymorphum gilvum SL003B-26A1 chromosome, complete genomePeptidase M, neutral zinc metallopeptidase, zinc-binding site1e-54213
NC_016845:4498097:450545245054524506432981Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,antirestriction protein4e-54211
NC_009832:4564752:4578801457880145798081008Serratia proteamaculans 568, complete genomedomain of unknown function DUF17385e-54211
NC_015259:673662:707112707112708053942Polymorphum gilvum SL003B-26A1 chromosome, complete genomePeptidase M, neutral zinc metallopeptidase, zinc-binding site7e-54211
NC_013716:3512950:352007635200763520987912Citrobacter rodentium ICC168, complete genomeputative conjugative transfer system protein TraC (fragment)1e-53210
NC_015567:346500:3718383718383728451008Serratia sp. AS9 chromosome, complete genomehypothetical protein2e-53209
NC_015566:345084:3716523716523726591008Serratia sp. AS12 chromosome, complete genomehypothetical protein2e-53209
NC_009832:426993:4431744431744442081035Serratia proteamaculans 568, complete genomedomain of unknown function DUF17382e-53209
NC_010067:3056774:307224830722483073159912Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-53209
NC_014414:1140357:117425711742571175156900Parvularcula bermudensis HTCC2503 chromosome, complete genomeantirestriction protein9e-53207
NC_014304:77715:790657906580051987Erwinia billingiae Eb661 plasmid pEB102, complete sequenceAntirestriction protein, ArdC family1e-52207
NC_012214:3303955:330581433058143306794981Erwinia pyrifoliae Ep1/96, complete genomeputative antirestriction protein1e-52206
NC_012214:537000:552064552064553044981Erwinia pyrifoliae Ep1/96, complete genomehypothetical protein1e-52206
NC_011283:1901229:190566619056661906616951Klebsiella pneumoniae 342 chromosome, complete genomeantirestriction protein3e-52205
NC_014029:331919:3898513898513908611011Yersinia pestis Z176003 chromosome, complete genomehypothetical protein3e-52205
NC_011745:3443371:3460061346006134611431083Escherichia coli ED1a chromosome, complete genomehypothetical protein2e-52205
NC_012731:560199:5813865813865823871002Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeputative antirestriction protein9e-52203
NC_011666:2109274:213260021326002133499900Methylocella silvestris BL2, complete genomedomain of unknown function DUF17381e-51203
NC_010725:3273261:328658832865883287538951Methylobacterium populi BJ001, complete genomeprotein of unknown function DUF17381e-51203
NC_012988:1280610:1283121128312112841281008Methylobacterium extorquens DM4, complete genomeAntirestriction protein1e-51203
NC_011745:2209288:2213451221345122144971047Escherichia coli ED1a chromosome, complete genomeputative Antirestriction protein ardC3e-51202
NC_011283:1811000:182691418269141827858945Klebsiella pneumoniae 342 chromosome, complete genomeantirestriction protein3e-51202
NC_017075:1674758:169543616954361696341906Rubrivivax gelatinosus IL144, complete genomeantirestriction protein ArdC7e-51201
NC_009668:445134:480142480142481098957Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequencehypothetical protein2e-50199
NC_007964:328825:339511339511340377867Nitrobacter hamburgensis X14, complete genomeantirestriction protein3e-50199
NC_014532:3596097:362516036251603626101942Halomonas elongata DSM 2581, complete genomedomain of unknown function DUF17383e-49195
NC_014500:3175283:3189619318961931906441026Dickeya dadantii 3937 chromosome, complete genomeantirestriction protein5e-49194
NC_009445:6621996:664501266450126645929918Bradyrhizobium sp. ORS 278 chromosome, complete genomeantirestriction protein7e-49194
NC_006371:1743982:177676117767611777738978Photobacterium profundum SS9 chromosome 2, complete sequenceHypothetical antirestriction protein1e-48193
NC_016845:3448881:348286634828663483810945Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative Antirestriction protein ardC2e-48192
NC_011751:2327014:2327959232795923290981140Escherichia coli UMN026 chromosome, complete genomeputative Antirestriction protein ardC2e-48192
NC_004547:1837500:185740318574031858335933Erwinia carotovora subsp. atroseptica SCRI1043, complete genomeantirestriction protein3e-48192
NC_015580:293803:315591315591316568978Novosphingobium sp. PP1Y, complete genomeArdC6e-48191
NC_012731:3411161:346374434637443464691948Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomeantirestriction protein7e-48191
NC_009485:3461051:348047734804773481433957Bradyrhizobium sp. BTAi1 chromosome, complete genomeardC antirestriction protein3e-47189
NC_016612:5296076:530133753013375302284948Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative Antirestriction protein ardC4e-47188
NC_009998:62000:6467564675659791305Shewanella baltica OS195 plasmid pS19501, complete sequencedomain of unknown function DUF17386e-47187
NC_015422:3581848:358714935871493588114966Alicycliphilus denitrificans K601 chromosome, complete genomehypothetical protein2e-46186
NC_016818:1795576:180246718024671803411945Rahnella aquatilis CIP 78.65 = ATCC 33071 chromosome, completeantirestriction protein3e-46185
NC_015259:624979:641779641779642687909Polymorphum gilvum SL003B-26A1 chromosome, complete genomePeptidase M, neutral zinc metallopeptidase, zinc-binding site2e-45182
NC_016809:112410:130400130400131353954Haemophilus influenzae 10810, complete genomeantirestriction protein5e-45181
NC_013730:2359939:2382278238227823833661089Spirosoma linguale DSM 74, complete genomedomain of unknown function DUF17381e-44180
NC_015259:3902136:391798839179883918893906Polymorphum gilvum SL003B-26A1 chromosome, complete genomePeptidase M, neutral zinc metallopeptidase, zinc-binding site2e-44179
NC_016609:7608723:760872376087237609625903Niastella koreensis GR20-10 chromosome, complete genomehypothetical protein6e-44177
NC_009512:3334579:334071933407193341657939Pseudomonas putida F1, complete genomedomain of unknown function DUF17384e-43175
NC_012483:729000:7369567369567379721017Acidobacterium capsulatum ATCC 51196, complete genomeputative antirestriction protein ArdC3e-42172
NC_009720:583060:6003046003046014631160Xanthobacter autotrophicus Py2, complete genome6e-42171
NC_010501:3671517:367755736775573678495939Pseudomonas putida W619, complete genomedomain of unknown function DUF17389e-42170
NC_013132:7954000:797334579733457974238894Chitinophaga pinensis DSM 2588, complete genomedomain of unknown function DUF17382e-41169
NC_015733:2581324:262753126275312628469939Pseudomonas putida S16 chromosome, complete genomehypothetical protein7e-41167
NC_010172:3946644:396319539631953964049855Methylobacterium extorquens PA1, complete genomedomain of unknown function DUF17383e-40165
NC_017986:409899:415007415007415945939Pseudomonas putida ND6 chromosome, complete genomehypothetical protein7e-40164
NC_016830:3869572:388559838855983886557960Pseudomonas fluorescens F113 chromosome, complete genomedna primase2e-39162
NC_014972:137184:144735144735145655921Desulfobulbus propionicus DSM 2032 chromosome, complete genomehypothetical protein1e-38160
NC_014973:595153:614487614487615380894Geobacter sp. M18 chromosome, complete genomehypothetical protein1e-38160
NC_012660:2045398:2094201209420120952531053Pseudomonas fluorescens SBW25 chromosome, complete genomeputative traC-like DNA primase2e-38159
NC_007492:3462929:346993534699353470897963Pseudomonas fluorescens PfO-1, complete genomeprobable DNA primase3e-38159
NC_012034:2555447:256040625604062561347942Anaerocellum thermophilum DSM 6725, complete genomedomain of unknown function DUF17387e-38157
NC_008781:2655071:2664051266405126652051155Polaromonas naphthalenivorans CJ2, complete genomedomain of unknown function DUF17387e-37154
NC_012918:1697860:171901317190131719906894Geobacter sp. M21 chromosome, complete genomehypothetical protein1e-36153
NC_014973:3452100:345278634527863453679894Geobacter sp. M18 chromosome, complete genomehypothetical protein2e-36152
NC_018000:2054098:205409820540982054919822Sinorhizobium fredii USDA 257 chromosome, complete genomehypothetical protein7e-36150
NC_009720:583060:593720593720594448729Xanthobacter autotrophicus Py2, complete genomehypothetical protein1e-34147
NC_015221:12389:3452534525374162892Nitrosomonas sp. AL212 plasmid pNAL21202, complete sequencehypothetical protein2e-34145
NC_013422:1755875:1778690177869017799221233Halothiobacillus neapolitanus c2, complete genomedomain of unknown function DUF17383e-34145
NC_014721:2135500:214140521414052142358954Caldicellulosiruptor kristjanssonii 177R1B chromosome, completehypothetical protein5e-34144
NC_014973:3290545:330162333016233302504882Geobacter sp. M18 chromosome, complete genomehypothetical protein6e-34144
NC_014836:1551965:157210815721081572953846Desulfurispirillum indicum S5 chromosome, complete genomehypothetical protein3e-32139
NC_014507:2034000:205169320516932052523831Methanoplanus petrolearius DSM 11571 chromosome, complete genomehypothetical protein2e-32139
NC_015694:48344:641366413665059924Runella slithyformis DSM 19594 plasmid pRUNSL03, complete sequencehypothetical protein6e-32138
NC_007802:3252300:325716432571643258141978Jannaschia sp. CCS1, complete genomeAntirestriction protein-like1e-31137
NC_017047:2042346:205801420580142058757744Rahnella aquatilis HX2 chromosome, complete genomeantirestriction protein2e-31136
NC_015152:1994659:200931820093182010208891Spirochaeta sp. Buddy chromosome, complete genomehypothetical protein1e-30134
NC_014220:2037560:205675720567572057602846Syntrophothermus lipocalidus DSM 12680 chromosome, complete genomedomain of unknown function DUF17385e-30131
NC_013731:55627:772597725978218960Spirosoma linguale DSM 74 plasmid pSLIN01, complete sequencedomain of unknown function DUF17388e-30130
NC_011149:4677412:468302346830234683661639Salmonella enterica subsp. enterica serovar Agona str. SL483,2e-29129
NC_015152:2549756:255597725559772556867891Spirochaeta sp. Buddy chromosome, complete genomehypothetical protein9e-29127
NC_009614:4201098:4233512423351242348371326Bacteroides vulgatus ATCC 8482 chromosome, complete genomeDNA primase5e-27122
NC_014914:127873:145017145017145982966Taylorella equigenitalis MCE9 chromosome, complete genomeToprim subdomain protein5e-27121
NC_003869:1971766:197310519731051973971867Thermoanaerobacter tengcongensis MB4, complete genomeantirestriction protein2e-26119
NC_011206:1264639:1264639126463912690124374Acidithiobacillus ferrooxidans ATCC 53993, complete genomedomain of unknown function DUF17383e-26119
NC_015942:1920693:1920693192069319231222430Acidithiobacillus ferrivorans SS3 chromosome, complete genomehypothetical protein1e-25117
NC_011206:200000:2199482199482250985151Acidithiobacillus ferrooxidans ATCC 53993, complete genomedomain of unknown function DUF17381e-25117
NC_006873:1:1147114721571011Bacteroides fragilis NCTC 9343 plasmid pBF9343, complete sequencehypothetical protein4e-25115
NC_016776:5174606:517958851795885180562975Bacteroides fragilis 638R, complete genomeputative DNA primase2e-24112
NC_003228:2010643:207068020706802071654975Bacteroides fragilis NCTC 9343, complete genomeputative DNA primase2e-24112
NC_015850:1279372:1289099128909912918882790Acidithiobacillus caldus SM-1 chromosome, complete genomeDNA primase8e-24111
NC_009792:3245368:326317732631773263533357Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-23110
NC_015164:4053765:4072279407227940734631185Bacteroides salanitronis DSM 18170 chromosome, complete genomehypothetical protein6e-23108
NC_014370:885937:9325609325609338791320Prevotella melaninogenica ATCC 25845 chromosome chromosome I,hypothetical protein2e-22106
NC_017025:1761918:1766124176612417682622139Flavobacterium indicum GPTSA100-9, complete genomehypothetical protein2e-22106
NC_017068:1401352:1419030141903014202981269Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein4e-22105
NC_010338:2136193:215044921504492151225777Caulobacter sp. K31, complete genomedomain of unknown function DUF17388e-22104
NC_015164:438000:4430504430504447381689Bacteroides salanitronis DSM 18170 chromosome, complete genomehypothetical protein4e-21102
NC_007802:1240989:125686412568641257463600Jannaschia sp. CCS1, complete genomeAntirestriction protein-like4e-2099
NC_009792:3245368:326259432625943263190597Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein1e-1997.4
NC_006347:3285998:3305547330554733072291683Bacteroides fragilis YCH46, complete genomeputative DNA primase5e-1995.1
NC_010338:2136193:215442621544262154869444Caulobacter sp. K31, complete genomeAntirestriction protein-like protein2e-1893.2
NC_003198:4453457:4467675446767544696241950Salmonella enterica subsp. enterica serovar Typhi str. CT18,hypothetical protein2e-1893.2
NC_012125:4536383:4550636455063645525851950Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-1893.2
NC_016832:4425330:4439548443954844414971950Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,hypothetical protein2e-1893.2
NC_004547:639726:6551506551506571111962Erwinia carotovora subsp. atroseptica SCRI1043, complete genomehypothetical protein8e-1684.7
NC_011149:4677412:468363146836314683933303Salmonella enterica subsp. enterica serovar Agona str. SL483,2e-1583.2
NC_012969:2136243:2159427215942721606291203Methylovorus glucosetrophus SIP3-4 chromosome, complete genomehypothetical protein5e-1478.6
NC_013421:701005:7323617323617343221962Pectobacterium wasabiae WPP163, complete genomedomain of unknown function DUF17387e-1478.2
NC_010602:2244729:231819323181932319149957Leptospira biflexa serovar Patoc strain 'Patoc 1 (Paris)'hypothetical protein3e-1169.7
NC_010842:2310756:232357923235792324535957Leptospira biflexa serovar Patoc strain 'Patoc 1 (Ames)' chromosomeantirestriction protein3e-1169.7
NC_012962:3864000:3870561387056138724111851Photorhabdus asymbiotica, complete genomehypothetical protein2e-1169.7
NC_017047:2042346:205991720599172060183267Rahnella aquatilis HX2 chromosome, complete genomeantirestriction protein9e-1167.8
NC_009720:870194:886965886965887186222Xanthobacter autotrophicus Py2, complete genomeputative ArdC antirestriction protein2e-0963.2
NC_015436:1287873:130649613064961306978483Spirochaeta coccoides DSM 17374 chromosome, complete genome8e-0858.2
NC_007802:1240989:125660112566011256879279Jannaschia sp. CCS1, complete genomeAntirestriction protein-like8e-0651.2