Pre_GI: BLASTP Hits

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Query: NC_011205:371001:389282 Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853

Start: 389282, End: 389728, Length: 447

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a bovine-adapted serovar that is genetically related to S. Enteritidis that lives in the bovine intestinal tract and can causes disease in humans. While rare in incidence, S. dublin infection classically produces a syndrome of sustained bacteremia with fever, resulting in high morbidity and mortality. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011147:2463299:247395724739572474691735Salmonella enterica subsp. enterica serovar Paratyphi A strtransmembrane regulator2e-82303
NC_011083:403022:432730432730433464735Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative transmembrane regulator2e-82303
NC_006511:2467763:247842124784212479155735Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpossible transmembrane regulator2e-82303
NC_011149:361765:368387368387369121735Salmonella enterica subsp. enterica serovar Agona str. SL483,putative transmembrane regulator7e-82301
NC_010102:2721374:273210127321012732865765Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein1e-81301
NC_011094:380428:398373398373399107735Salmonella enterica subsp. enterica serovar Schwarzengrund strtransmembrane regulator2e-81300
NC_006905:401154:430112430112430876765Salmonella enterica subsp. enterica serovar Choleraesuis strputative inner membrane protein4e-81299
NC_003197:367430:385573385573386337765Salmonella typhimurium LT2, complete genomeputative inner membrane protein1e-80298
NC_016810:366908:385057385057385821765Salmonella enterica subsp. enterica serovar Typhimurium strtransmembrane regulator1e-80298
NC_016856:365665:386264386264387028765Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative inner membrane protein1e-80298
NC_016857:366908:385057385057385821765Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74putative inner membrane protein1e-80298
NC_016863:367404:385553385553386317765Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative inner membrane protein1e-80298
NC_012125:373630:380252380252380986735Salmonella enterica subsp. enterica serovar Paratyphi C straintransmembrane regulator6e-81298
NC_011080:383441:390063390063390797735Salmonella enterica subsp. enterica serovar Newport str. SL254,putative transmembrane regulator5e-81298
NC_017046:366905:385084385084385818735Salmonella enterica subsp. enterica serovar Typhimurium str. 798transmembrane regulator2e-80297
NC_011294:346915:364877364877365641765Salmonella enterica subsp. enterica serovar Enteritidis strtransmembrane regulator6e-80295
NC_004631:2584244:259491425949142595648735Salmonella enterica subsp. enterica serovar Typhi Ty2, completepossible transmembrane regulator1e-78291
NC_003198:378844:385465385465386199735Salmonella enterica subsp. enterica serovar Typhi str. CT18,possible transmembrane regulator1e-78291
NC_016832:2581145:259181525918152592549735Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,transmembrane regulator1e-78291
NC_016831:2627515:263824026382402638635396Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative transmembrane regulator3e-70263
NC_011094:380428:401567401567402310744Salmonella enterica subsp. enterica serovar Schwarzengrund strresponse regulator1e-1995.5
NC_016831:2627515:263504826350482635791744Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative transmembrane regulator2e-1994.7
NC_011274:376970:386772386772387515744Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91transmembrane regulator2e-1994.7
NC_011149:361765:371579371579372322744Salmonella enterica subsp. enterica serovar Agona str. SL483,putative response regulator2e-1994.7
NC_011083:403022:435911435911436654744Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,putative response regulator2e-1994.4
NC_011080:383441:393244393244393987744Salmonella enterica subsp. enterica serovar Newport str. SL254,putative response regulator2e-1994.4
NC_010102:2721374:272890927289092729652744Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein3e-1994
NC_016832:2581145:258861225886122589355744Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,transmembrane regulator3e-1994
NC_003198:378844:388659388659389402744Salmonella enterica subsp. enterica serovar Typhi str. CT18,possible transmembrane regulator3e-1994
NC_004631:2584244:259171125917112592454744Salmonella enterica subsp. enterica serovar Typhi Ty2, completepossible transmembrane regulator3e-1994
NC_012125:373630:383397383397384176780Salmonella enterica subsp. enterica serovar Paratyphi C straintransmembrane regulator2e-1891.3
NC_011147:2463299:247082524708252471508684Salmonella enterica subsp. enterica serovar Paratyphi A strtransmembrane regulator4e-1063.5
NC_006511:2467763:247528924752892475972684Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCpossible transmembrane regulator4e-1063.5