Pre_GI: BLASTP Hits

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Query: NC_011184:597496:598790 Vibrio fischeri MJ11 chromosome I, complete sequence

Start: 598790, End: 599143, Length: 354

Host Lineage: Aliivibrio fischeri; Aliivibrio; Vibrionaceae; Vibrionales; Proteobacteria; Bacteria

General Information: This strain was isolated from a pinecone fish, Monocentris japonica, light-emitting organs in Japan. This genus is abundant in marine or freshwater environments such as estuaries, brackish ponds, or coastal areas; regions that provide an important reservoir for the organism in between outbreaks of the disease. Vibrio can affect shellfish, finfish, and other marine animals and a number of species are pathogenic for humans. This organism is found in marine environments and was originally named by Bernard Fischer during a sea voyage in the 1800s. It is a symbiont in fish and squids and is responsible for light generation in those organisms, which use it as a defense mechanism to avoid predators.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012917:3565268:356632635663263566664339Pectobacterium carotovorum subsp. carotovorum PC1, complete genomesigma 54 modulation protein/ribosomal protein S30EA9e-1889
NC_006905:2805877:282490528249052825243339Salmonella enterica subsp. enterica serovar Choleraesuis strribosome associated factor, stabilizes ribosomes against dissociation1e-1581.6
NC_011080:2789744:281019328101932810531339Salmonella enterica subsp. enterica serovar Newport str. SL254,ribosomal subunit interface protein1e-1581.6
NC_003198:2703013:272354827235482723886339Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative sigma(54) modulation protein1e-1581.6
NC_011149:2701916:272110327211032721441339Salmonella enterica subsp. enterica serovar Agona str. SL483,ribosomal subunit interface protein1e-1581.6
CP002185:2889656:290808629080862908427342Escherichia coli W, complete genomecold shock protein associated with 30S ribosomal subunit1e-1478.6
CU928160:2785792:280422028042202804561342Escherichia coli IAI1 chromosome, complete genomecold shock protein associated with 30S ribosomal subunit1e-1478.6
CP002516:1196000:119743011974301197771342Escherichia coli KO11, complete genomesigma 54 modulation protein/ribosomal protein S30EA1e-1478.6
NC_013850:1198134:119954911995491199884336Klebsiella variicola At-22 chromosome, complete genomeribosomal subunit interface protein2e-1478.2
NC_016901:1527877:153977215397721540128357Shewanella baltica OS678 chromosome, complete genomesigma 54 modulation protein/ribosomal protein S30EA3e-1477.4
NC_009052:1394000:140539914053991405755357Shewanella baltica OS155, complete genomesigma 54 modulation protein/ribosomal protein S30EA3e-1477.4
NC_009665:1495473:150815715081571508513357Shewanella baltica OS185 chromosome, complete genomesigma 54 modulation protein/ribosomal protein S30EA3e-1477
NC_009648:3192483:321044032104403210769330Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genometranslation inhibitor protein RaiA8e-1475.9
NC_009656:5185704:518931351893135189621309Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein5e-1063.2