Pre_GI: BLASTP Hits

Some Help

Query: NC_011094:638552:660129 Salmonella enterica subsp. enterica serovar Schwarzengrund str

Start: 660129, End: 660524, Length: 396

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This serovar is the predominant cause of Salmonellosis in Southeast Asia, a major source of imported food products to the USA. It was also the cause of the first recognized outbreak of fluoroquinolone-resistant salmonellosis in the USA. Recent reports suggest that high-level fluoroquinolone resistance is emerging in S. Schwarzengrund in different parts of the world. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011745:3245000:325591832559183256358441Escherichia coli ED1a chromosome, complete genomeputative single-stranded DNA-binding protein (SSB) (Helix-destabilizing protein)2e-39160
NC_013353:1305712:133174613317461332156411Escherichia coli O103:H2 str. 12009, complete genomesingle stranded DNA-binding protein2e-38157
AP010958:1305712:133174613317461332156411Escherichia coli O103:H2 str. 12009 DNA, complete genomeputative single stranded DNA-binding protein2e-38157
NC_011750:527470:539993539993540442450Escherichia coli IAI39 chromosome, complete genomeputative single-stranded DNA-binding protein6e-34142
NC_016809:1778000:178581017858101786244435Haemophilus influenzae 10810, complete genomessDNA-binding protein3e-0753.9
NC_002128:35000:471304713047582453Escherichia coli O157:H7 str. Sakai plasmid pO157, completesingle-strand binding protein6e-0752.8
NC_007414:56508:696666966670157492Escherichia coli O157:H7 EDL933 plasmid pO157, complete sequencesingle-stranded DNA-binding protein6e-0752.8
NC_014922:1360000:137953613795361379970435Haemophilus influenzae F3047 chromosome, complete genomesingle-strand binding protein1e-0651.6
NC_015519:1081539:109212310921231092512390Tepidanaerobacter sp. Re1 chromosome, complete genomesingle-strand binding protein3e-0650.4
NC_007146:1405459:141575814157581416192435Haemophilus influenzae 86-028NP, complete genomeSingle-strand binding protein3e-0650.4
NC_014922:825396:836565836565836999435Haemophilus influenzae F3047 chromosome, complete genomesingle-stranded DNA-binding protein3e-0650.4