Pre_GI: BLASTP Hits

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Query: NC_011083:3171171:3189787 Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,

Start: 3189787, End: 3190332, Length: 546

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This is a multidrug resistant strain. Salmonella enterica subsp. enterica serovar Heidelberg is one of the more common serovars causing disease in the USA. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016832:3020000:303525530352553035800546Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Isopentenyl-diphosphate Delta-isomerase2e-104377
NC_003198:3042000:306112030611203061665546Salmonella enterica subsp. enterica serovar Typhi str. CT18,isopentenyl-diphosphate delta-isomerase2e-104377
NC_004631:3030580:304661530466153047160546Salmonella enterica subsp. enterica serovar Typhi Ty2, completeisopentenyl-diphosphate delta-isomerase2e-104377
NC_013716:5201097:520562552056255206170546Citrobacter rodentium ICC168, complete genomeisopentenyl-diphosphate delta-isomerase2e-81301
NC_020181:4800298:480192248019224802476555Enterobacter aerogenes EA1509E, complete genomeIsopentenyl-diphosphate delta-isomerase3e-78290
NC_016612:477407:501759501759502307549Klebsiella oxytoca KCTC 1686 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase3e-77287
NC_011283:785973:790648790648791202555Klebsiella pneumoniae 342 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase6e-77286
NC_014121:4299500:432552443255244326066543Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeisopentenyl-diphosphate delta-isomerase5e-65246
NC_020064:1611820:161946716194671620012546Serratia marcescens FGI94, complete genomeisopentenyl-diphosphate delta-isomerase2e-47188
NC_006087:2439252:244433524443352444892558Leifsonia xyli subsp. xyli str. CTCB07, complete genomeisopentenyl-diphosphate delta-isomerase8e-44176
NC_016789:1805503:181121218112121811763552Corynebacterium diphtheriae PW8 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase8e-43172
NC_002935:1763886:177152117715211772072552Corynebacterium diphtheriae NCTC 13129, complete genomeisopentenyl-diphosphate delta-isomerase3e-42171
NC_016782:1745374:175631317563131756864552Corynebacterium diphtheriae 241 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase3e-42171
NC_016783:1758319:176402817640281764579552Corynebacterium diphtheriae INCA 402 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase3e-42171
NC_016786:1751204:175691317569131757464552Corynebacterium diphtheriae HC01 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase3e-42171
NC_016787:1726978:173268717326871733238552Corynebacterium diphtheriae HC03 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase3e-42171
NC_016788:1730458:173616717361671736718552Corynebacterium diphtheriae HC04 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase3e-42171
NC_016790:1702856:170856517085651709116552Corynebacterium diphtheriae VA01 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase3e-42171
NC_016799:1787687:179620317962031796754552Corynebacterium diphtheriae 31A chromosome, complete genomeisopentenyl-diphosphate delta-isomerase3e-42171
NC_016802:1709840:172077917207791721330552Corynebacterium diphtheriae HC02 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase2e-42171
NC_016801:1782401:178811017881101788661552Corynebacterium diphtheriae C7 (beta) chromosome, complete genomeisopentenyl-diphosphate delta-isomerase2e-42171
NC_015635:1906790:1906790190679019084601671Microlunatus phosphovorus NM-1, complete genomeisopentenyl-diphosphate delta-isomerase/polyprenyl diphosphate synthase3e-38157
NC_013169:1410384:142725314272531427795543Kytococcus sedentarius DSM 20547, complete genomeisopentenyl-diphosphate delta-isomerase4e-33140
NC_014830:3870000:388680738868073887445639Intrasporangium calvum DSM 43043 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase1e-32139
NC_013508:3593000:359637835963783596899522Edwardsiella tarda EIB202, complete genomeputative isopentenyldiphosphate isomerase3e-21101
NC_012779:3652737:365985336598533660371519Edwardsiella ictaluri 93-146, complete genomeisopentenyl-diphosphate delta-isomerase, putative4e-2097.8
NC_010801:238430:262604262604263134531Burkholderia multivorans ATCC 17616 chromosome 3, completeisopentenyl-diphosphate delta-isomerase1e-1892.4
NC_014820:1618606:161797716179771618609633Cenarchaeum symbiosum A, complete genomeisopentenyl-diphosphate delta-isomerase5e-1890.5
NC_018012:2159814:217075721707572171329573Thiocystis violascens DSM 198 chromosome, complete genomeisopentenyl-diphosphate delta-isomerase9e-1889.7
NC_013202:1492434:149493514949351495546612Halomicrobium mukohataei DSM 12286, complete genomeIsopentenyl-diphosphate Delta-isomerase6e-1683.6
NC_010001:1884500:188666918866691887664996Clostridium phytofermentans ISDg, complete genomeNUDIX hydrolase6e-1167
NC_009617:1487110:149324314932431493821579Clostridium beijerinckii NCIMB 8052 chromosome, complete genome2e-0961.6
NC_013222:2795919:281124528112452811793549Robiginitalea biformata HTCC2501, complete genomeHydrolase of MutT (Nudix) family protein7e-0960.1
NC_015164:1877981:189039018903901890890501Bacteroides salanitronis DSM 18170 chromosome, complete genomeNUDIX hydrolase9e-0959.7
NC_016629:3396500:340510634051063405669564Desulfovibrio africanus str. Walvis Bay chromosome, completeNUDIX hydrolase3e-0858.2
NC_007907:4926548:493094149309414931462522Desulfitobacterium hafniense Y51, complete genomehypothetical protein2e-0652.4
NC_009439:794498:814201814201814737537Pseudomonas mendocina ymp, complete genomeNUDIX hydrolase3e-0651.6
NC_001263:72681:801228012280637516Deinococcus radiodurans R1 chromosome 1, complete sequenceMutT/nudix family protein5e-0650.8