Pre_GI: BLASTP Hits

Some Help

Query: NC_010803:483713:499042 Chlorobium limicola DSM 245, complete genome

Start: 499042, End: 499542, Length: 501

Host Lineage: Chlorobium limicola; Chlorobium; Chlorobiaceae; Chlorobiales; Chlorobi; Bacteria

General Information: Isolated from Gilroy Hot Spring. The green sulfur bacteria (GSB; Phylum Chlorobi ) are commonly found in illuminated, stratified, and anoxic aquatic environments, sediments, and other sulfide-rich environments including hot springs. This bacterium has been used to model a variety of enzyme and reaction center pathways, including ATP-citrate lyase, isocitrate dehydrogenase, and the reverse Krebs cycle used in photosynthesis. Now called the "reductive carbolic acid cycle", this was found to be the sole carbon dioxide assimilation pathway in other green sulfur bacteria since its discovery.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016609:5986500:599181659918165992322507Niastella koreensis GR20-10 chromosome, complete genomeCRISPR-associated exonuclease, Cas4 family1e-26119
NC_000918:246792:246281246281246814534Aquifex aeolicus VF5, complete genomehypothetical protein3e-26117
NC_016610:2489415:249990424999042500434531Tannerella forsythia ATCC 43037 chromosome, complete genomeCRISPR-associated protein Cas45e-26116
NC_002950:2098454:210559221055922106104513Porphyromonas gingivalis W83, complete genomeCRISPR-associated protein Cas43e-25114
NC_020134:1783000:179073617907361791239504Clostridium stercorarium subsp. stercorarium DSM 8532, completeCRISPR-associated protein Cas47e-25112
NC_013216:921377:930256930256930744489Desulfotomaculum acetoxidans DSM 771, complete genomeCRISPR-associated protein Cas43e-24110
NC_012440:1249941:126312012631201263632513Persephonella marina EX-H1, complete genomecrispr-associated protein Cas44e-23107
NC_015975:1056731:107010810701081070596489Lactobacillus ruminis ATCC 27782 chromosome, complete genomeCRISPR-associated protein Cas44e-23107
NC_009486:1103915:111150711115071112025519Thermotoga petrophila RKU-1 chromosome, complete genomeCRISPR-associated Cas4 family protein1e-22105
NC_000916:983500:100064310006431001170528Methanothermobacter thermautotrophicus str. Delta H, completehypothetical protein4e-21100
NC_019942:1370872:137681713768171377323507Aciduliprofundum sp. MAR08-339, complete genomeCRISPR-associated protein Cas42e-2097.8
NC_011978:699500:711549711549712067519Thermotoga neapolitana DSM 4359, complete genomeCRISPR-associated exonuclease, Cas4 family6e-2096.7
NC_014150:1423758:142606014260601426563504Brachyspira murdochii DSM 12563 chromosome, complete genomeCRISPR-associated protein Cas42e-1995.1
NC_007955:1198994:121052612105261211125600Methanococcoides burtonii DSM 6242, complete genomeCRISPR-associated protein Cas47e-1993.2
NC_015571:290355:301917301917302348432Porphyromonas gingivalis TDC60, complete genomeCRISPR-associated Cas4 family protein7e-1889.7
NC_015589:3053504:306256030625603063066507Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeCRISPR-associated protein Cas44e-1787.4
NC_009718:1024000:103147610314761031967492Fervidobacterium nodosum Rt17-B1, complete genomeCRISPR-associated Cas4 family protein3e-1787.4
NC_014206:1467000:147714614771461477643498Geobacillus sp. C56-T3 chromosome, complete genomeCRISPR-associated protein Cas41e-1685.5
NC_013501:1881692:189948418994841900026543Rhodothermus marinus DSM 4252, complete genomeCRISPR-associated protein Cas42e-1685.1
NC_015966:1316901:132550513255051326047543Rhodothermus marinus SG0.5JP17-172 chromosome, complete genomeCRISPR-associated protein Cas43e-1684.3
NC_013799:1117750:112633411263341126840507Hydrogenobacter thermophilus TK-6, complete genomeCRISPR-associated exonuclease5e-1683.6
NC_017161:1117741:112619211261921126698507Hydrogenobacter thermophilus TK-6 chromosome, complete genomeCRISPR-associated exonuclease, Cas4 family5e-1683.6
NC_011296:1039749:107237610723761072879504Thermodesulfovibrio yellowstonii DSM 11347, complete genomeCRISPR-associated protein Cas41e-1582.8
NC_019897:3251639:328650232865023287020519Thermobacillus composti KWC4 chromosome, complete genomeCRISPR-associated protein Cas43e-1581.3
NC_015865:685882:698981698981699493513Thermococcus sp. 4557 chromosome, complete genomeCRISPR-associated protein Cas48e-1579.7
NC_021184:823000:830924830924831430507Desulfotomaculum gibsoniae DSM 7213, complete genomeCRISPR-associated protein Cas49e-1579.7
NC_017096:260333:267628267628268137510Caldisericum exile AZM16c01, complete genomeputative CRISPR-associated protein1e-1478.6
NC_016051:460624:468237468237468773537Thermococcus sp. AM4 chromosome, complete genomeCRISPR-associated RecB family exonuclease Cas4a3e-1477.8
NC_015387:2072237:208160920816092082127519Marinithermus hydrothermalis DSM 14884 chromosome, complete genomeCRISPR-associated protein Cas43e-1477.8
NC_015680:841783:847106847106847621516Pyrococcus yayanosii CH1 chromosome, complete genomeCRISPR-associated protein Cas45e-1477
NC_000961:135493:153401153401153889489Pyrococcus horikoshii OT3, complete genomehypothetical protein1e-1375.5
NC_007681:1082000:108938810893881089909522Methanosphaera stadtmanae DSM 3091, complete genomepredicted RecB family exonuclease5e-1270.5
NC_013926:974668:979781979781980266486Aciduliprofundum boonei T469 chromosome, complete genomeCRISPR-associated protein Cas42e-1168.6
NC_014915:332784:346954346954347463510Geobacillus sp. Y412MC52 chromosome, complete genomeCRISPR-associated protein Cas48e-1166.2
NC_013526:567500:579081579081579578498Thermobaculum terrenum ATCC BAA-798 chromosome 2, complete genomeCRISPR-associated protein Cas49e-1166.2
NC_013510:1023348:104243710424371042946510Thermomonospora curvata DSM 43183, complete genomeCRISPR-associated protein Cas41e-1065.5
NC_014209:2204515:220833822083382208835498Thermoanaerobacter mathranii subsp. mathranii str. A3 chromosome,CRISPR-associated protein Cas42e-1065.5
NC_008148:258292:274071274071274559489Rubrobacter xylanophilus DSM 9941, complete genomeCRISPR-associated protein Cas45e-0960.5
NC_007681:482445:488317488317488814498Methanosphaera stadtmanae DSM 3091, complete genomepredicted exonuclease2e-0858.2
NC_014624:140000:147799147799148293495Eubacterium limosum KIST612 chromosome, complete genomeCRISPR-associated protein Cas41e-0755.8
NC_009921:1668306:168463116846311685146516Frankia sp. EAN1pec, complete genomeprotein of unknown function DUF835e-0753.9
NC_015587:583530:598894598894599109216Hydrogenobaculum sp. SHO chromosome, complete genomeCRISPR-associated protein Cas43e-0650.8
NC_015557:583475:598839598839599054216Hydrogenobaculum sp. 3684 chromosome, complete genome3e-0650.8