Pre_GI: BLASTP Hits

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Query: NC_010674:2417199:2418257 Clostridium botulinum B str. Eklund 17B, complete genome

Start: 2418257, End: 2419975, Length: 1719

Host Lineage: Clostridium botulinum; Clostridium; Clostridiaceae; Clostridiales; Firmicutes; Bacteria

General Information: Clostridium botulinum B str. Eklund 17B is a nonproteolytic botulism neurotoxin B strain. This strain was isolated from marine sediments taken off the coast of Washington, USA and was not associated with botulism. This genus comprises about 150 metabolically diverse species of anaerobes that are ubiquitous in virtually all anoxic habitats where organic compounds are present, including soils, aquatic sediments and the intestinal tracts of animals and humans. This shape is attributed to the presence of endospores that develop under conditions unfavorable for vegetative growth and distend single cells terminally or sub-terminally. Spores germinate under conditions favorable for vegetative growth, such as anaerobiosis and presence of organic substrates. It is believed that present day Mollicutes (Eubacteria) have evolved regressively (i.e., by genome reduction) from gram-positive clostridia-like ancestors with a low GC content in DNA. This organism produces one of the most potent and deadly neurotoxins known, a botulinum toxin that prevents the release of acetylcholine at the neuromuscular junction, thereby inhibiting muscle contraction and causing paralysis. In most cases the diseased person dies of asphyxiation as a result of paralysis of chest muscles involved in breathing. The spores are heat-resistant and can survive in inadequately heated, prepared, or processed foods. Spores germinate under favorable conditions (anaerobiosis and substrate-rich environment) and bacteria start propagating very rapidly, producing the toxin.Botulinum toxin, and C. botulinum cells, has been found in a wide variety of foods, including canned ones. Almost any food that has a high pH (above 4.6) can support growth of the bacterium. Honey is the most common vehicle for infection in infants. Food poisoning through C. botulinum is the most frequent type of infection caused by this bacterium. The wound botulism that occurs when C. botulinum infects an individual via an open wound is much rarer and is very similar to tetanus disease. There are several types of botulinum toxin known (type A through type F), all of them being neurotoxic polypeptides. The most common and widely distributed are strains and serovars of C. botulinum that produce type A toxin.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018664:159291:1629791629791646041626Clostridium acidurici 9a chromosome, complete genomeamine oxidase4e-118425
NC_020244:2049753:2066634206663420681331500Bacillus subtilis XF-1, complete genomehypothetical protein1e-41171
NC_014976:170683:1858431858431872671425Bacillus subtilis BSn5 chromosome, complete genomeamine oxidase, flavin-containing2e-40167
NC_004193:1335626:1336825133682513382821458Oceanobacillus iheyensis HTE831, complete genomeL-amino acid oxidase1e-34147
NC_016147:513819:5380535380535396391587Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeflavin monoamine oxidase-like protein1e-22108
NC_015379:6226661:6254940625494062566221683Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative oxidoreductase2e-1584.3
NC_004578:2671508:2691134269113426926571524Pseudomonas syringae pv. tomato str. DC3000, complete genomeamine oxidase, flavin-containing1e-1482
NC_008095:6143738:6165783616578361671921410Myxococcus xanthus DK 1622, complete genomeamine oxidase, flavin-containing4e-1480.1
NC_009512:469000:4723704723704740521683Pseudomonas putida F1, complete genomeamine oxidase5e-1479.7
NC_015733:443122:4463894463894480711683Pseudomonas putida S16 chromosome, complete genomeamine oxidase1e-1378.6
NC_014158:1479313:1480790148079014824871698Tsukamurella paurometabola DSM 20162 chromosome, complete genomeamine oxidase4e-1170.1
NC_014472:3530274:3547224354722435486631440Flavobacteriales bacterium HTCC2170 chromosome, complete genomeflavin-containing amine oxidase5e-1169.7
NC_007005:1705406:1725786172578617274591674Pseudomonas syringae pv. syringae B728a, complete genomeAmine oxidase7e-1065.9
NC_009956:88354:1110911110911127161626Dinoroseobacter shibae DFL 12 plasmid pDSHI02, complete sequenceL-amino-acid oxidase2e-0964.3
NC_014120:88679:98514985141002021689Burkholderia sp. CCGE1002 plasmid pBC201, complete sequenceamine oxidase3e-0964.3
NC_010627:532407:5405945405945422821689Burkholderia phymatum STM815 plasmid pBPHY02, complete sequenceamine oxidase3e-0963.9
NC_011982:206784:2153462153462175172172Agrobacterium vitis S4 plasmid pTiS4, complete sequencetryptophan 2-monooxygenase2e-0861.2
NC_003308:1:1637216372186392268Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequencetryptophan 2-monooxygenase1e-0758.5
NC_003065:27163:4977549775520422268Agrobacterium tumefaciens str. C58 plasmid Ti, complete sequencetryptophan monooxygenase1e-0758.5