Pre_GI: BLASTP Hits

Some Help

Query: NC_010572:8493946:7112 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 7112, End: 7642, Length: 531

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010572:1:711271127642531Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein9e-83305
NC_010572:8493946:853828885382888538818531Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein9e-83305
NC_016582:9459566:9459566945956694610681503Streptomyces bingchenggensis BCW-1 chromosome, complete genome30S ribosomal protein S13e-1064.7
NC_004369:1525787:1525787152578715272441458Corynebacterium efficiens YS-314, complete genome30S ribosomal protein S13e-0961.6
NC_012704:947409:9626289626289640941467Corynebacterium kroppenstedtii DSM 44385, complete genome30S ribosomal protein S13e-0961.2
NC_014830:1871135:1888678188867818901591482Intrasporangium calvum DSM 43043 chromosome, complete genomeSSU ribosomal protein S1P3e-0961.2
NC_014039:869826:8709278709278724231497Propionibacterium acnes SK137 chromosome, complete genome30S ribosomal protein S11e-0859.3
NC_006085:854500:8545978545978560931497Propionibacterium acnes KPA171202, complete genome30S ribosomal protein S11e-0859.3
NC_016511:844500:8445618445618460571497Propionibacterium acnes TypeIA2 P.acn31 chromosome, complete30S ribosomal protein S11e-0859.3
NC_016512:843938:8439388439388454341497Propionibacterium acnes TypeIA2 P.acn17 chromosome, complete30S ribosomal protein S11e-0859.3
NC_016516:834260:8353618353618368571497Propionibacterium acnes TypeIA2 P.acn33 chromosome, complete30S ribosomal protein S11e-0859.3
NC_014643:1986440:2032090203209020335501461Rothia dentocariosa ATCC 17931 chromosome, complete genome30S ribosomal protein S13e-0857.8
NC_014166:455378:4730354730354746871653Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeRNA binding S1 domain-containing protein7e-0856.6
NC_014761:74500:7450274502762951794Oceanithermus profundus DSM 14977 chromosome, complete genomeSSU ribosomal protein s1p1e-0755.8
NC_002937:1548081:1549690154969015511531464Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completeribosomal protein S1, putative2e-0755.1
NC_008601:168063:1727671727671744371671Francisella tularensis subsp. novicida U112, complete genome30S ribosomal protein S12e-0755.1
NC_015389:1375315:1408343140834314096111269Coriobacterium glomerans PW2 chromosome, complete genomeSSU ribosomal protein S1P7e-0753.5
NC_015500:159199:1651911651911662791089Treponema brennaborense DSM 12168 chromosome, complete genomeRNA binding S1 domain protein9e-0753.1
NC_019892:3086493:3106774310677431085821809Singulisphaera acidiphila DSM 18658 chromosome, complete genome30S ribosomal protein S12e-0652.4
NC_008369:1830442:1844220184422018459441725Francisella tularensis subsp. holarctica OSU18, complete genomeribosomal protein S12e-0652
NC_003454:249304:2618222618222643052484Fusobacterium nucleatum subsp. nucleatum ATCC 25586, completeLytB protein2e-0652
NC_009749:1825453:1839283183928318409531671Francisella tularensis subsp. holarctica FTA, complete genomeribosomal protein S12e-0651.6
NC_007880:1830803:1844633184463318463031671Francisella tularensis subsp. holarctica, complete genome30S ribosomal protein S12e-0651.6
NC_015577:1974821:1974821197482119772442424Treponema azotonutricium ZAS-9 chromosome, complete genomecytidylate kinase/30S ribosomal protein S12e-0651.6
NC_013173:2305394:2325597232559723270151419Desulfomicrobium baculatum DSM 4028, complete genomeRNA binding S1 domain protein7e-0650.1
NC_013124:1107202:1121926112192611232091284Acidimicrobium ferrooxidans DSM 10331, complete genomeRNA binding S1 domain protein8e-0650.1