Pre_GI: BLASTP Hits

Some Help

Query: NC_010501:4379920:4387936 Pseudomonas putida W619, complete genome

Start: 4387936, End: 4388715, Length: 780

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004129:2328491:234971423497142350442729Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, Cro/CI family2e-70265
NC_004129:4368356:437957643795764380364789Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, Cro/CI family3e-52205
NC_011770:860944:870555870555871343789Pseudomonas aeruginosa LESB58, complete genometranscriptional regulator4e-52204
NC_007954:3887488:389894838989483899637690Shewanella denitrificans OS217, complete genometransciptional regulator2e-49196
NC_007712:1516589:153094915309491531668720Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein8e-44177
NC_011770:1431740:144568614456861446441756Pseudomonas aeruginosa LESB58, complete genomehypothetical protein4e-41168
NC_009665:3869904:389559738955973896322726Shewanella baltica OS185 chromosome, complete genomeputative phage repressor3e-40165
NC_013361:3287671:329508932950893295796708Escherichia coli O26:H11 str. 11368 chromosome, complete genomephage repressor protein CI5e-35147
NC_007712:3067000:309927530992753099997723Sodalis glossinidius str. 'morsitans', complete genomeputative transcriptional regulator2e-34145
NC_007712:1516589:153299615329961533706711Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein3e-32138
NC_015379:6023926:603163860316386032267630Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,putative regulatory protein8e-29127
NC_016830:5994494:600195060019506002681732Pseudomonas fluorescens F113 chromosome, complete genomecro ci family transcriptional regulator1e-28126
NC_009778:959982:977343977343978032690Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein2e-28125
NC_005773:5310339:531033953103395311070732Pseudomonas syringae pv. phaseolicola 1448A, complete genometranscriptional regulator, Cro/CI family6e-27121
NC_014972:2798670:281793528179352818681747Desulfobulbus propionicus DSM 2032 chromosome, complete genomeputative phage repressor5e-1788.2
NC_009999:38832:459184591846562645Shewanella baltica OS195 plasmid pS19502, complete sequenceputative phage repressor2e-1583.2
NC_017506:3248724:325658932565893257266678Marinobacter adhaerens HP15 chromosome, complete genomephage repressor6e-1478.2
NC_017986:3283433:329590632959063296607702Pseudomonas putida ND6 chromosome, complete genomehypothetical protein1e-1376.6
NC_015379:4691868:469213346921334692831699Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative phage regulatory protein2e-1272.8
NC_011748:824367:827354827354828109756Escherichia coli 55989, complete genomeRegulatory protein CI from bacteriophage origin4e-1168.6
NC_011751:643976:651596651596652351756Escherichia coli UMN026 chromosome, complete genomeregulatory protein CI from bacteriophage origin4e-1168.6
CU928145:824367:827354827354828109756Escherichia coli 55989 chromosome, complete genomeRegulatory protein CI from bacteriophage origin4e-1168.6
NC_009567:904922:904922904922905692771Haemophilus influenzae PittGG chromosome, complete genomehypothetical protein5e-1168.2
NC_015663:4522109:453774545377454538440696Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative phage repressor protein CI2e-1065.9
NC_008258:269806:287337287337287969633Shigella flexneri 5 str. 8401, complete genomeputative prophage repressor CI5e-1065.1
NC_014034:3111981:311804831180483118797750Rhodobacter capsulatus SB1003 chromosome, complete genomeXRE family transcriptional regulator9e-1063.9
NC_010682:2422500:243745924374592438367909Ralstonia pickettii 12J chromosome 1, complete sequenceputative phage repressor2e-0962.8
NC_012691:779826:793864793864794634771Tolumonas auensis DSM 9187, complete genomeputative phage repressor3e-0962.4
NC_010645:406794:414160414160415113954Bordetella avium 197N, complete genomephage repressor protein3e-0962.4
NC_002937:1578213:158843315884331589107675Desulfovibrio vulgaris subsp. vulgaris str. Hildenborough, completetranscriptional regulator, putative9e-0960.8
NC_015062:99969:103850103850104560711Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequencephage repressor1e-0860.5
NC_010554:2646806:265134526513452651992648Proteus mirabilis HI4320, complete genomephage repressor2e-0859.7
NC_010002:4508467:451639745163974517047651Delftia acidovorans SPH-1, complete genomeputative phage repressor2e-0859.7
NC_007722:2954876:296208129620812962716636Erythrobacter litoralis HTCC2594, complete genomeprophage MuMc02, peptidase, family S243e-0858.9
NC_010814:294394:306642306642307334693Geobacter lovleyi SZ, complete genomeputative phage repressor4e-0858.5
NC_007146:1405459:142911714291171430085969Haemophilus influenzae 86-028NP, complete genomehypothetical protein7e-0857.8
NC_014228:3282500:331939033193903320001612Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein2e-0755.8
NC_007794:2304768:232155423215542322195642Novosphingobium aromaticivorans DSM 12444, complete genomeputative phage repressor3e-0755.8
NC_008609:251608:267950267950268657708Pelobacter propionicus DSM 2379, complete genomeputative phage repressor5e-0755.1
NC_006511:2501500:251687725168772517566690Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCtranscriptional activator-regulatory protein5e-0755.1
NC_011147:2496808:251241325124132513102690Salmonella enterica subsp. enterica serovar Paratyphi A strtranscriptional activator-regulatory protein5e-0755.1
NC_016860:364981:379270379270379959690Salmonella enterica subsp. enterica serovar Typhimurium strtranscriptional activator-regulatory protein5e-0755.1
NC_014924:936158:953071953071953427357Pseudoxanthomonas suwonensis 11-1 chromosome, complete genomehelix-turn-helix domain protein7e-0754.3
NC_014640:4951076:4958381495838149594841104Achromobacter xylosoxidans A8 chromosome, complete genomepeptidase S24-like family protein8e-0754.3
NC_014922:825396:848309848309849277969Haemophilus influenzae F3047 chromosome, complete genomehypothetical protein1e-0653.5
NC_011740:2769961:278688227868822787610729Escherichia fergusonii ATCC 35469, complete genomeRegulatory protein CI from bacteriophage origin2e-0652.8
NC_011415:600375:616589616589617281693Escherichia coli SE11 chromosome, complete genomephage transcriptional regulator2e-0652.8
NC_014722:771483:787153787153787560408Burkholderia rhizoxinica HKI 454, complete genomehypothetical protein5e-0652
NC_009778:1556222:156473615647361565341606Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein6e-0651.6
NC_021066:2226826:224423422442342244866633Raoultella ornithinolytica B6, complete genomehypothetical protein7e-0651.2