Pre_GI: BLASTP Hits

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Query: NC_010501:1629107:1634063 Pseudomonas putida W619, complete genome

Start: 1634063, End: 1639039, Length: 4977

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016830:5109953:5131208513120851361844977Pseudomonas fluorescens F113 chromosome, complete genomeYD repeat protein0855
NC_016830:5109953:5116855511685551215794725Pseudomonas fluorescens F113 chromosome, complete genomeYD repeat protein0690
NC_010322:1623599:1627462162746216325315070Pseudomonas putida GB-1 chromosome, complete genomeYD repeat-containing protein1e-148528
NC_009512:4287605:4307156430715643123275172Pseudomonas putida F1, complete genomeYD repeat protein6e-143509
NC_017986:1042642:1053283105328310571283846Pseudomonas putida ND6 chromosome, complete genomeYD repeat-/RHS repeat-containing protein4e-129464
NC_009512:4287605:4295234429523442990793846Pseudomonas putida F1, complete genomeYD repeat-containing protein4e-129464
NC_015733:1680500:1685350168535016891323783Pseudomonas putida S16 chromosome, complete genomeYD repeat/RHS repeat-containing protein4e-110400
NC_012214:3502992:3519126351912635240904965Erwinia pyrifoliae Ep1/96, complete genomeNematicidal protein5e-101370
NC_010694:614985:6149856149856199614977Erwinia tasmaniensis, complete genomeSimilar to Nematicidal protein 23e-97357
NC_010322:1623599:1638966163896616429043939Pseudomonas putida GB-1 chromosome, complete genomeYD repeat-containing protein8e-92340
NC_014228:1712339:1716790171679017217544965Xenorhabdus nematophila ATCC 19061, complete genomeputative Nematicidal protein 27e-81303
NC_013892:2108175:2155453215545321598414389Xenorhabdus bovienii SS-2004 chromosome, complete genomeNematicidal protein 23e-73278
NC_009668:46010:5085650856559525097Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceYD repeat-containing protein3e-64248
NC_010067:4418000:4427234442723444311303897Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-53211
NC_009783:1665610:1681367168136716860464680Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein7e-37157
NC_004578:5623783:5636765563676556417745010Pseudomonas syringae pv. tomato str. DC3000, complete genomeYD repeat protein2e-27126
NC_012214:2673058:2684270268427026893635094Erwinia pyrifoliae Ep1/96, complete genomeSimilar to the nematicidal protein 21e-1896.7
NC_012214:2673058:2679038267903826841285091Erwinia pyrifoliae Ep1/96, complete genomeSimilar to the nematicidal protein 21e-1896.7
NC_010506:4951500:4969347496934749731503804Shewanella woodyi ATCC 51908, complete genomeYD repeat protein7e-1687.8
NC_010694:2565580:2576972257697225820625091Erwinia tasmaniensis, complete genomeNematicidal protein 21e-1586.7
NC_013961:1246454:1254272125427212593655094Erwinia amylovora, complete genomeProtein rhsC precursor2e-1586.3
NC_013971:1283942:1291766129176612968955130Erwinia amylovora ATCC 49946 chromosome, complete genomeRHS family protein3e-1585.9
NC_013971:1283942:1297034129703413021245091Erwinia amylovora ATCC 49946 chromosome, complete genomeRHS family protein7e-1377.8
NC_012491:4692667:4705828470582847094093582Brevibacillus brevis NBRC 100599, complete genomehypothetical protein7e-1377.8
NC_013961:1246454:1259504125950412645945091Erwinia amylovora, complete genomeTeneurin-17e-1377.8
NC_016791:1620858:1642953164295316484275475Clostridium sp. BNL1100 chromosome, complete genomeRHS repeat-associated core domain-containing protein8e-1377.4
NC_002947:4805060:481730448173044818098795Pseudomonas putida KT2440, complete genomehypothetical protein9e-1377.4
NC_014507:1610409:1610409161040916144524044Methanoplanus petrolearius DSM 11571 chromosome, complete genomeYD repeat protein5e-1274.7
NC_015733:1680500:1684093168409316853251233Pseudomonas putida S16 chromosome, complete genomeYD repeat-containing protein5e-1274.7
NC_013216:3061491:3079669307966930834843816Desulfotomaculum acetoxidans DSM 771, complete genomeYD repeat protein1e-1173.6
NC_010506:4951500:4968117496811749693221206Shewanella woodyi ATCC 51908, complete genomehypothetical protein4e-1172
NC_005085:2609934:2628514262851426296831170Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein5e-1171.6
NC_005085:2457295:2462175246217524632871113Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein6e-1171.2
NC_020210:901240:9069919069919135546564Geobacillus sp. GHH01, complete genomecell wall-associated protein1e-1070.5
NC_008027:4280000:4290862429086242956764815Pseudomonas entomophila L48, complete genomehypothetical protein1e-1070.5
NC_016593:3116145:3122850312285031285165667Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein3e-1068.9
NC_010694:2565580:2571660257166025767505091Erwinia tasmaniensis, complete genomeSimilar to the nematicidal protein 23e-1068.9
NC_014376:3593500:3596181359618136016945514Clostridium saccharolyticum WM1 chromosome, complete genomeYD repeat protein6e-1068.2
NC_011899:1969187:1983804198380419906376834Halothermothrix orenii H 168, complete genomeYD repeat protein8e-1067.4
NC_005085:2609934:2613466261346626145661101Chromobacterium violaceum ATCC 12472, complete genomehypothetical protein1e-0967
NC_015953:4908069:4916907491690749221445238Streptomyces sp. SirexAA-E chromosome, complete genomeYD repeat-containing protein1e-0967
NC_003552:2502689:2532488253248825338101323Methanosarcina acetivorans C2A, complete genomehypothetical protein5e-0965.1
NC_003155:210240:2298252298252369377113Streptomyces avermitilis MA-4680, complete genomelarge secreted protein1e-0863.9
NC_003155:320979:3294523294523365467095Streptomyces avermitilis MA-4680, complete genomelarge secreted protein1e-0863.9
NC_018524:4599809:4619731461973146257336003Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeRHS repeat-associated core domain protein2e-0863.2
NC_013929:4549988:4570978457097845773856408Streptomyces scabiei 87.22 chromosome, complete genomeligand-binding protein2e-0863.2
NC_014210:4188448:4196635419663542030726438Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,YD repeat protein3e-0862.4
NC_017068:870000:8817918817918888107020Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein5e-0861.6
NC_016627:1723104:1755569175556917598014233Clostridium clariflavum DSM 19732 chromosome, complete genome1e-0760.5
NC_007645:5747721:57599405759940577152811589Hahella chejuensis KCTC 2396, complete genomeRhs family protein2e-0760.1
NC_018524:5748421:5761760576176057682066447Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeRHS repeat-associated core domain protein2e-0760.1
NC_016627:1723104:1751383175138317533501968Clostridium clariflavum DSM 19732 chromosome, complete genomeRHS repeat-associated core domain-containing protein2e-0759.3
NC_014935:342491:356168356168357010843Nitratifractor saLSUginis DSM 16511 chromosome, complete genomehypothetical protein4e-0758.5
NC_003552:2502689:2534487253448725411406654Methanosarcina acetivorans C2A, complete genomehypothetical protein4e-0758.5
NC_016627:1723104:1728338172833817372628925Clostridium clariflavum DSM 19732 chromosome, complete genomeRHS repeat-associated core domain-containing protein4e-0758.5
NC_021177:6954675:6960817696081769687187902Streptomyces fulvissimus DSM 40593, complete genomeYD repeat protein4e-0758.5
NC_006510:1014500:1019616101961610265216906Geobacillus kaustophilus HTA426, complete genomecell wall-associated protein precursor1e-0657
NC_017030:5785681:5790705579070557970856381Corallococcus coralloides DSM 2259 chromosome, complete genomehypothetical protein1e-0657
NC_013093:5791961:5799746579974658066186873Actinosynnema mirum DSM 43827, complete genomeYD repeat protein2e-0656.6
NC_010995:1459831:1466825146682514685701746Cellvibrio japonicus Ueda107, complete genomeParB-like nuclease domain2e-0656.6
NC_009483:1448552:1462966146296614648521887Geobacter uraniireducens Rf4 chromosome, complete genomeYD repeat-containing protein2e-0656.2
NC_014720:4170:1290912909218938985Caldicellulosiruptor kronotskyensis 2002 chromosome, completeyd repeat protein2e-0656.2
NC_012034:6469:1264412644217279084Anaerocellum thermophilum DSM 6725, complete genomeYD repeat protein2e-0656.2
NC_017068:870000:8895128895128930423531Selenomonas ruminantium subsp. lactilytica TAM6421, completehypothetical protein2e-0656.2
NC_015711:3193774:3203507320350732105297023Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein2e-0655.8
NC_011979:4062000:4081438408143840853043867Geobacter sp. FRC-32, complete genomeYD repeat-containing protein3e-0655.8
NC_010995:948041:9778569778569804142559Cellvibrio japonicus Ueda107, complete genomeputative lipoprotein5e-0655.1
NC_015383:368500:3855573855573917366180Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequenceRhs family protein5e-0655.1
NC_016791:3851454:38636243863624387462411001Clostridium sp. BNL1100 chromosome, complete genomeRHS repeat-associated core domain-containing protein5e-0654.7
NC_016627:1342172:1349492134949213558876396Clostridium clariflavum DSM 19732 chromosome, complete genomeRHS repeat-associated core domain-containing protein6e-0654.7