Pre_GI: BLASTP Hits

Some Help

Query: NC_010322:1:17291 Pseudomonas putida GB-1 chromosome, complete genome

Start: 17291, End: 17614, Length: 324

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida strain GB-1, a fresh water, Gram-negative gamma-proteobacterium, is a genetically tractable, robust manganese (Mn) oxidizer, and as such, is an ideal model for unraveling the catalytic mechanism for, and the molecular regulation of Mn(IV) oxide production and its eventual accumulation on the cell surface at the onset of stationary phase. Since its isolation from Green Bay nearly 20 years ago by Ken Nealson’s group (then at the Center for Great Lakes Studies, Univ. Wisconsin-Milwaukee, USA), it has been the non spore-forming, model organism (along with the closely-related strain MnB1) for molecular genetic studies of Mn(II) oxidization, protein transport and biofilm formation and for biochemical studies on protein purification and Mn(III)-pyoverdine binding. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009512:1:165091650916850342Pseudomonas putida F1, complete genomehypothetical protein5e-54209
NC_010501:1:165291652916870342Pseudomonas putida W619, complete genomehypothetical protein5e-54209
NC_010501:5735656:574012557401255740448324Pseudomonas putida W619, complete genomehypothetical protein8e-47185
NC_015733:5955467:596184959618495962196348Pseudomonas putida S16 chromosome, complete genomehypothetical protein3e-45180
NC_017986:3283433:329265532926553292972318Pseudomonas putida ND6 chromosome, complete genomehypothetical protein4e-35146
NC_015410:2698572:274324427432442743555312Pseudomonas mendocina NK-01 chromosome, complete genomehypothetical protein3e-0960.5
NC_009439:2427120:245334724533472453658312Pseudomonas mendocina ymp, complete genomehypothetical protein3e-0960.5
NC_010682:1913941:1928081192808119293701290Ralstonia pickettii 12J chromosome 1, complete sequencecopper resistance B precursor6e-0959.7
NC_010501:5735656:5738293573829357401101818Pseudomonas putida W619, complete genomecopper-resistance protein, CopA family5e-0856.6
NC_017986:3283433:3292987329298732949661980Pseudomonas putida ND6 chromosome, complete genomeCopA family copper resistance protein1e-0755.5
NC_010501:1:1686716867188251959Pseudomonas putida W619, complete genomecopper-resistance protein, CopA family1e-0755.5
NC_010322:1:1762917629195871959Pseudomonas putida GB-1 chromosome, complete genomeCopA family copper resistance protein1e-0755.5
NC_002947:6123608:6131833613183361338422010Pseudomonas putida KT2440, complete genomecopper resistance protein A1e-0755.5
NC_009512:1:1684716847188622016Pseudomonas putida F1, complete genomecopper-resistance protein, CopA family1e-0755.5
NC_009439:2427120:2453671245367124554851815Pseudomonas mendocina ymp, complete genomeCopA family copper resistance protein2e-0754.7
NC_015410:2698572:2741426274142627432311806Pseudomonas mendocina NK-01 chromosome, complete genomeCopA family copper resistance protein2e-0754.7
NC_015733:5955467:5959897595989759618341938Pseudomonas putida S16 chromosome, complete genomeCopA family copper resistance protein3e-0753.9
NC_010501:1:1542415424165391116Pseudomonas putida W619, complete genomecopper resistance B precursor1e-0651.6
NC_009512:1:1540415404165191116Pseudomonas putida F1, complete genomecopper resistance B precursor1e-0651.6
NC_010322:1:1618616186173011116Pseudomonas putida GB-1 chromosome, complete genomecopper resistance B1e-0651.6
NC_008344:1:2328823288251711884Nitrosomonas eutropha C91, complete genomecopper-resistance protein, CopA family protein4e-0650.4
NC_009434:3611738:3656827365682736587071881Pseudomonas stutzeri A1501, complete genomecopper resistance protein A9e-0648.9