Pre_GI: BLASTP Hits

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Query: NC_010117:285230:304566 Coxiella burnetii RSA 331, complete genome

Start: 304566, End: 304763, Length: 198

Host Lineage: Coxiella burnetii; Coxiella; Coxiellaceae; Legionellales; Proteobacteria; Bacteria

General Information: This strain (RSA 331; Hentzerling) is associated with acute Q fever and was isolated from the blood of an infected patient in northern Italy in 1945. This organism is widely distributed in nature and can cause infections in reptiles, birds, and mammals. It causes Q fever, or 'query' fever, an atypical pneumonia first associated with abattoir workers in Australia. Transmission may be through insect vectors such as ticks that have bitten an infected wild or domesticated animal, or through an aerosol produced by domesticated animals such as sheep or cattle. The presence of a plasmid is believed to be associated with virulence and pathogenicity, however C. burnetii isolates containing plasmid QpDG are avirulent in guinea pigs and plasmidless isolates have been associated with endocarditis in humans. Coxiella burnetii has a developmental life cycle, and can grow vegetatively through binary fission, or asymmetrically and produce a spore-like cell. The spore-like cell may enable the organism to exist extracellularly for small amounts of time. This bacterium is an obligate intracellular pathogen. It is endocytosed by a host cell, a macrophage for example, and lives and replicates inside the phagolysozome, a unique property of this organism. The genome encodes proteins that have a higher than average pI, which may enable adaptation to the acidic environment of the phagolysozome. The chromosome also contains genes for a number of detoxification and stress response proteins such as dismutases that allow growth in the oxidative environment. The type IV system is similar to the one found in Legionella, which may be important for intracellular survival. This organism produces numerous ankyrin-repeat proteins that may be involved in interactions with the host cell. The genome has 83 pseudogenes, which may be a result of the typical genome-wide degradation observed with other intracellular organisms and also has a group I intron in the 23S ribosomal RNA gene.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009727:1822877:182729118272911827488198Coxiella burnetii Dugway 7E9-12, complete genomeribosomal protein L293e-1994
NC_011527:1688447:169286016928601693057198Coxiella burnetii CbuG_Q212, complete genomeLSU ribosomal protein L29P3e-1994
NC_002971:211331:229294229294229491198Coxiella burnetii RSA 493, complete genomeribosomal protein L293e-1994
NC_011528:386417:405761405761405958198Coxiella burnetii CbuK_Q154, complete genomeLSU ribosomal protein L29P3e-1994
NC_016632:1496000:151284215128421513036195Serratia symbiotica str. 'Cinara cedri' chromosome, complete50S ribosomal protein L292e-0754.7
NC_013508:3387272:339916333991633399354192Edwardsiella tarda EIB202, complete genome50S ribosomal protein L292e-0754.3
NC_015061:366552:383726383726383917192Rahnella sp. Y9602 chromosome, complete genomeribosomal protein L292e-0754.3
NC_017047:370837:386380386380386571192Rahnella aquatilis HX2 chromosome, complete genome50S ribosomal protein L292e-0754.3
NC_013282:3962188:399348639934863993677192Cronobacter turicensis, complete genome50S ribosomal protein L293e-0753.9
NC_017256:545204:556380556380556577198Buchnera aphidicola str. Ak (Acyrthosiphon kondoi) chromosome,50S ribosomal protein L294e-0753.5
NC_015572:4209000:422263242226324222823192Methylomonas methanica MC09 chromosome, complete genome50S ribosomal protein L291e-0652
NC_002528:546500:555460555460555657198Buchnera aphidicola str. APS (Acyrthosiphon pisum), complete50S ribosomal protein L292e-0651.2
NC_004061:540354:556341556341556538198Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome50S ribosomal protein L292e-0650.8
NC_017259:523840:533774533774533971198Buchnera aphidicola str. Ua (Uroleucon ambrosiae) chromosome,50S ribosomal protein L293e-0650.8
NC_011833:545713:556896556896557093198Buchnera aphidicola str. 5A (Acyrthosiphon pisum) chromosome,50S ribosomal protein L292e-0650.8
NC_011834:546738:556674556674556871198Buchnera aphidicola str. Tuc7 (Acyrthosiphon pisum) chromosome,50S ribosomal protein L292e-0650.8
NC_017252:545236:556420556420556617198Buchnera aphidicola str. TLW03 (Acyrthosiphon pisum) chromosome,50S ribosomal protein L292e-0650.8
NC_017253:545177:556358556358556555198Buchnera aphidicola str. JF99 (Acyrthosiphon pisum) chromosome,50S ribosomal protein L292e-0650.8
NC_017254:545236:556418556418556615198Buchnera aphidicola str. JF98 (Acyrthosiphon pisum) chromosome,50S ribosomal protein L292e-0650.8
NC_017255:545270:556452556452556649198Buchnera aphidicola str. LL01 (Acyrthosiphon pisum) chromosome,50S ribosomal protein L292e-0650.8
NC_007645:6327428:634075363407536340944192Hahella chejuensis KCTC 2396, complete genomeribosomal protein L294e-0650.1
NC_002516:4747154:476292847629284763119192Pseudomonas aeruginosa PAO1, complete genome50S ribosomal protein L296e-0649.7