Pre_GI: BLASTP Hits

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Query: NC_010102:2178594:2189598 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 2189598, End: 2189861, Length: 264

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016831:2108557:211955821195582119821264Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein3e-44177
NC_011094:973140:981590981590981853264Salmonella enterica subsp. enterica serovar Schwarzengrund strMaoC like domain-containing protein1e-43174
NC_010067:2488141:250106625010662501911846Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-36150
NC_006905:946418:954866954866955078213Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein3e-1994
NC_011080:924326:932781932781932978198Salmonella enterica subsp. enterica serovar Newport str. SL254,9e-1992.4
NC_011083:967260:975715975715975912198Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,9e-1992.4
NC_011205:944125:952585952585952782198Salmonella enterica subsp. enterica serovar Dublin str. CT_020218539e-1992.4
NC_012125:894955:903409903409903606198Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein9e-1992.4
NC_016860:959609:968063968063968260198Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein9e-1992.4
NC_016863:920346:928800928800928997198Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein9e-1992.4
NC_008313:2629281:264064026406402641500861Ralstonia eutropha H16 chromosome 1, complete sequencehypothetical protein3e-1063.9
NC_007952:495000:513099513099513941843Burkholderia xenovorans LB400 chromosome 2, complete sequencehypothetical protein4e-1063.5
NC_014323:3195178:319761631976163198476861Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein1e-0962
NC_007953:572926:594489594489595337849Burkholderia xenovorans LB400 chromosome 3, complete sequencehypothetical protein1e-0755.1