Pre_GI: BLASTP Hits

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Query: NC_010102:1829357:1831834 Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,

Start: 1831834, End: 1834761, Length: 2928

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain (SGSC 4150; ATCC BAA-1250) was isolated from a stool sample of an infected woman in Penang, Malaysia, May 16, 2002. This strain is susceptible to antibiotics, and was classified as serovar Paratyphi B because it was unable to metabolize D-tartrate. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011080:2761403:2773287277328727762142928Salmonella enterica subsp. enterica serovar Newport str. SL254,gifsy-1 prophage RecE01911
NC_016856:2812905:2824789282478928277162928Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sexodeoxyribonuclease VIII-like protein01906
NC_017046:2756000:2770321277032127732482928Salmonella enterica subsp. enterica serovar Typhimurium str. 798exodeoxyribonuclease viii01905
NC_009792:1770106:1790893179089317938052913Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein01323
NC_015663:4522109:4541184454118445441742991Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative entero exodeoxyribonuclease VIII01223
NC_013850:2182337:2188707218870721918053099Klebsiella variicola At-22 chromosome, complete genomeexodeoxyribonuclease VIII01201
NC_009648:1541699:1546756154675615498723117Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomeputative entero exodeoxyribonuclease VIII01200
NC_011283:3177350:3192012319201231936611650Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein0777
NC_020211:2094500:2095626209562620982682643Serratia marcescens WW4, complete genomeexodeoxyribonuclease1e-177624
NC_003198:1908238:1927497192749719306253129Salmonella enterica subsp. enterica serovar Typhi str. CT18,exodeoxyribonuclease VIII2e-142507
NC_012779:1966205:1966205196620519686852481Edwardsiella ictaluri 93-146, complete genomegifsy-1 prophage RecE1e-134481
NC_013508:1687432:1711632171163217141062475Edwardsiella tarda EIB202, complete genomeGifsy-1 prophage protein1e-133478
NC_016612:3803130:3810509381050938126472139Klebsiella oxytoca KCTC 1686 chromosome, complete genomeexodeoxyribonuclease VIII8e-114412
NC_011205:1345511:1354431135443113571212691Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853exonuclease VIII4e-66253
NC_016831:1734292:1756528175652817592182691Salmonella enterica subsp. enterica serovar Gallinarum/pullorumExodeoxyribonuclease VIII1e-65252
NC_020181:2097066:2114821211482121172682448Enterobacter aerogenes EA1509E, complete genomeExodeoxyribonuclease VIII3e-61237
NC_002655:2142587:2160309216030921629092601Escherichia coli O157:H7 EDL933, complete genomeputative exodeoxyribonuclease VIII of prophage CP-933R2e-45185
NC_000913:1404000:1412810141281014154102601Escherichia coli K12, complete genome 3' specific dsDNA exonuclease' target='_blank' title='Search database for similar gene annotations'>Rac prophage; exonuclease VIII, 5' -> 3' specific dsDNA exonuclease2e-45185
AC_000091:1407693:1416500141650014191002601Escherichia coli W3110 DNA, complete genome 3' specific dsDNA exonuclease' target='_blank' title='Search database for similar gene annotations'>exonuclease VIII, 5' -> 3' specific dsDNA exonuclease2e-45185
NC_010473:1493983:1502206150220615048062601Escherichia coli str. K-12 substr. DH10B, complete genome 3' specific dsDNA exonuclease' target='_blank' title='Search database for similar gene annotations'>Rac prophage; exonuclease VIII, 5' -> 3' specific dsDNA exonuclease2e-45185
NC_012759:1296000:1304869130486913074692601Escherichia coli BW2952 chromosome, complete genomeexonuclease VIII2e-45185
NC_012967:1403733:1411956141195614145562601Escherichia coli B str. REL606 chromosome, complete genomeexonuclease VIII2e-45185
CP002516:2580774:2599925259992526025252601Escherichia coli KO11, complete genomeexodeoxyribonuclease VIII1e-45185
CP002185:1493280:1503325150332515059252601Escherichia coli W, complete genomeRac prophage; exonuclease VIII, 5' -3' specific dsDNA exonuclease1e-45185
NC_016902:2580774:2599925259992526025252601Escherichia coli KO11FL chromosome, complete genomeexodeoxyribonuclease VIII1e-45185
NC_011415:1472500:1478214147821414808142601Escherichia coli SE11 chromosome, complete genomeexonuclease VIII1e-45185
NC_008570:2216736:2226502222650222279891488Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein1e-40169
NC_014121:1682638:1682638168263816845391902Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative exodeoxyribonuclease VIII4e-29130
NC_011294:1465500:146968014696801470303624Salmonella enterica subsp. enterica serovar Enteritidis strphage encoded exodeoxyribonuclease2e-20102
NC_011205:1391971:140026314002631401210948Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853exodeoxyribonuclease 82e-20102
NC_011080:1944226:197152119715211972468948Salmonella enterica subsp. enterica serovar Newport str. SL254,exodeoxyribonuclease 82e-20102
NC_010102:1137247:1150514115051411516201107Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-20101
NC_011094:1923870:1944300194430019454061107Salmonella enterica subsp. enterica serovar Schwarzengrund strexodeoxyribonuclease 82e-1895.1
NC_016856:1957263:197776019777601978413654Salmonella enterica subsp. enterica serovar Typhimurium str. 14028SRecE-like protein1e-1276.3
NC_009801:1756610:1774599177459917770762478Escherichia coli E24377A, complete genomeexonuclease family protein2e-1275.1
NC_011274:1299475:131117213111721311666495Salmonella enterica subsp. enterica serovar Gallinarum str. 287/913e-1275.1
NC_010468:2265423:2265423226542322679002478Escherichia coli ATCC 8739, complete genomeExonuclease RNase T and DNA polymerase III6e-1273.9
CP002516:2305659:2308505230850523109822478Escherichia coli KO11, complete genomeExonuclease RNase T and DNA polymerase III6e-1273.9
NC_016902:2305659:2308505230850523109822478Escherichia coli KO11FL chromosome, complete genomeExonuclease RNase T and DNA polymerase III6e-1273.9
NC_017046:1902788:192328619232861923939654Salmonella enterica subsp. enterica serovar Typhimurium str. 798bacteriophage encoded Exodeoxyribonuclease VIII8e-1273.2
NC_016860:1943203:196189619618961962549654Salmonella enterica subsp. enterica serovar Typhimurium strexonuclease VIII8e-1273.2
NC_016857:1903426:192392319239231924576654Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74exodeoxyribonuclease VIII8e-1273.2
NC_016810:1903426:192392319239231924576654Salmonella enterica subsp. enterica serovar Typhimurium str8e-1273.2
NC_016831:1690811:171309117130911713744654Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein9e-1273.2
NC_011083:1993672:201537620153762016029654Salmonella enterica subsp. enterica serovar Heidelberg str. SL476, 3' specific dsdna exonuclease' target='_blank' title='Search database for similar gene annotations'>rac prophage; exonuclease VIII, 5' -> 3' specific dsdna exonuclease1e-1172.8
NC_003197:1945858:196651419665141967008495Salmonella typhimurium LT2, complete genomeRecE-like protein1e-1172.8
NC_016863:1905454:192611019261101926604495Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1RecE-like protein1e-1172.8
NC_009801:2193000:2216941221694122190072067Escherichia coli E24377A, complete genomehypothetical protein4e-1171.2
NC_011415:2277559:2304543230454323067592217Escherichia coli SE11 chromosome, complete genomehypothetical protein5e-1170.9
CP002797:4812799:4828966482896648311822217Escherichia coli NA114, complete genomeHypothetical protein9e-1170.1
NC_011748:1408280:1409701140970114121722472Escherichia coli 55989, complete genomeputative exonuclease from phage origin1e-1069.7
CU928145:1408280:1409701140970114121722472Escherichia coli 55989 chromosome, complete genomeputative exonuclease from phage origin1e-1069.7
NC_011294:1220526:124705712470571247556500Salmonella enterica subsp. enterica serovar Enteritidis str2e-1068.9
NC_011601:1269500:1269547126954712720182472Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeexonuclease2e-1068.6
NC_012214:1974500:1978496197849619807392244Erwinia pyrifoliae Ep1/96, complete genomeSimilarities with exodeoxyribonuclease VIII4e-1067.8
NC_011751:1859606:1882358188235818848292472Escherichia coli UMN026 chromosome, complete genomeputative exonuclease from phage origin6e-1067
NC_009801:1419324:1419324141932414217952472Escherichia coli E24377A, complete genomeexonuclease family protein1e-0966.6
NC_009801:1392696:1419324141932414217952472Escherichia coli E24377A, complete genomeexonuclease family protein1e-0966.6
NC_014394:993465:996493996493997305813Gallionella capsiferriformans ES-2 chromosome, complete genomehypothetical protein4e-0758.2
NC_013174:2455420:246447624644762465324849Jonesia denitrificans DSM 20603, complete genomehypothetical protein2e-0655.5