Pre_GI: BLASTP Hits

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Query: NC_010067:4418000:4427234 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 4427234, End: 4431130, Length: 3897

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012214:3502992:3519126351912635240904965Erwinia pyrifoliae Ep1/96, complete genomeNematicidal protein8e-134479
NC_010694:614985:6149856149856199614977Erwinia tasmaniensis, complete genomeSimilar to Nematicidal protein 25e-132473
NC_014228:1712339:1716790171679017217544965Xenorhabdus nematophila ATCC 19061, complete genomeputative Nematicidal protein 28e-98359
NC_013892:2108175:2155453215545321598414389Xenorhabdus bovienii SS-2004 chromosome, complete genomeNematicidal protein 22e-94348
NC_016830:5109953:5116855511685551215794725Pseudomonas fluorescens F113 chromosome, complete genomeYD repeat protein2e-94348
NC_009668:46010:5085650856559525097Ochrobactrum anthropi ATCC 49188 chromosome 2, complete sequenceYD repeat-containing protein3e-88327
NC_016830:5109953:5131208513120851361844977Pseudomonas fluorescens F113 chromosome, complete genomeYD repeat protein5e-81303
NC_009512:4287605:4307156430715643123275172Pseudomonas putida F1, complete genomeYD repeat protein2e-58228
NC_010501:1629107:1634063163406316390394977Pseudomonas putida W619, complete genomeYD repeat protein5e-55217
NC_010322:1623599:1627462162746216325315070Pseudomonas putida GB-1 chromosome, complete genomeYD repeat-containing protein6e-54213
NC_017986:1042642:1053283105328310571283846Pseudomonas putida ND6 chromosome, complete genomeYD repeat-/RHS repeat-containing protein3e-53211
NC_009512:4287605:4295234429523442990793846Pseudomonas putida F1, complete genomeYD repeat-containing protein3e-53211
NC_009783:1665610:1681367168136716860464680Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequencehypothetical protein2e-45185
NC_010322:1623599:1638966163896616429043939Pseudomonas putida GB-1 chromosome, complete genomeYD repeat-containing protein4e-44181
NC_010506:4951500:4969347496934749731503804Shewanella woodyi ATCC 51908, complete genomeYD repeat protein1e-35153
NC_013971:1283942:1297034129703413021245091Erwinia amylovora ATCC 49946 chromosome, complete genomeRHS family protein3e-32141
NC_013961:1246454:1259504125950412645945091Erwinia amylovora, complete genomeTeneurin-13e-32141
NC_013961:1246454:1254272125427212593655094Erwinia amylovora, complete genomeProtein rhsC precursor1e-29132
NC_013971:1283942:1291766129176612968955130Erwinia amylovora ATCC 49946 chromosome, complete genomeRHS family protein2e-29132
NC_015733:1680500:1685350168535016891323783Pseudomonas putida S16 chromosome, complete genomeYD repeat/RHS repeat-containing protein2e-29132
NC_010694:2565580:2576972257697225820625091Erwinia tasmaniensis, complete genomeNematicidal protein 23e-28128
NC_012214:2673058:2684270268427026893635094Erwinia pyrifoliae Ep1/96, complete genomeSimilar to the nematicidal protein 26e-28127
NC_010694:2565580:2571660257166025767505091Erwinia tasmaniensis, complete genomeSimilar to the nematicidal protein 22e-27125
NC_012214:2673058:2679038267903826841285091Erwinia pyrifoliae Ep1/96, complete genomeSimilar to the nematicidal protein 26e-27124
NC_012034:390273:3950643950644011716108Anaerocellum thermophilum DSM 6725, complete genomeYD repeat-containing protein5e-1274.3
NC_019892:429975:4299754299754371207146Singulisphaera acidiphila DSM 18658 chromosome, complete genomeRHS repeat-associated core domain-containing protein2e-1172.4
NC_015381:1892546:1895812189581219004494638Burkholderia gladioli BSR3 chromosome 1, complete sequenceRhs family protein6e-1170.9
NC_014392:355443:3600883600883675987511Caldicellulosiruptor obsidiansis OB47 chromosome, complete genome6e-1170.9
NC_004578:5623783:5636765563676556417745010Pseudomonas syringae pv. tomato str. DC3000, complete genomeYD repeat protein1e-1070.1
NC_011899:1969187:1983804198380419906376834Halothermothrix orenii H 168, complete genomeYD repeat protein1e-0863.5
NC_012034:6469:1264412644217279084Anaerocellum thermophilum DSM 6725, complete genomeYD repeat protein2e-0862.4
NC_008027:4280000:4290862429086242956764815Pseudomonas entomophila L48, complete genomehypothetical protein4e-0758.5
NC_007645:5747721:57599405759940577152811589Hahella chejuensis KCTC 2396, complete genomeRhs family protein3e-0758.5
NC_014720:4170:1290912909218938985Caldicellulosiruptor kronotskyensis 2002 chromosome, completeyd repeat protein4e-0758.2
NC_020541:1510782:1519890151989015236963807Rhodanobacter sp. 2APBS1, complete genomeRHS repeat-associated core domain protein5e-0758.2
NC_007645:2112622:21126222112622212455211931Hahella chejuensis KCTC 2396, complete genomeRhs family protein6e-0757.8
NC_007492:2310793:2323362232336223280924731Pseudomonas fluorescens PfO-1, complete genomeRhs family protein2e-0656.2
NC_011741:256932:2705612705612748144254Escherichia coli IAI1 chromosome, complete genomeputative Rhs Core protein3e-0655.1
CU928160:256932:2705612705612748144254Escherichia coli IAI1 chromosome, complete genomePutative Rhs Core protein3e-0655.1
NC_011741:256932:2628582628582670844227Escherichia coli IAI1 chromosome, complete genomeRhsG core protein with extension8e-0653.9
CU928160:256932:2628582628582670844227Escherichia coli IAI1 chromosome, complete genomeRhsG core protein with extension8e-0653.9