Pre_GI: BLASTP Hits

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Query: NC_010067:2488141:2508905 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 2508905, End: 2509060, Length: 156

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016514:1627664:163883616388361639285450Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein3e-21100
NC_010067:2488141:251155225115522512001450Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein5e-1993.2
NC_010067:2488141:250595125059512506400450Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-1992.4
NC_014121:1822895:184423118442311844686456Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completetype VI secretion system protein1e-1685.1
NC_011283:2103500:212274421227442123187444Klebsiella pneumoniae 342 chromosome, complete genometype VI secretion system lysozyme-like protein1e-1582
NC_013961:3269368:329308232930823293534453Erwinia amylovora, complete genomeCOG3518: putative type VI secretion system, core protein1e-1581.6
NC_013971:465318:477848477848478300453Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein1e-1581.6
NC_017060:125480:155976155976156407432Rahnella aquatilis HX2 plasmid PRA1, complete sequencetype VI secretion system lysozyme-like protein1e-1375.1
NC_014837:3766426:378651337865133786953441Pantoea sp. At-9b chromosome, complete genometype VI secretion system lysozyme-like protein2e-1374.7
NC_009381:1655731:167642916764291676881453Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein3e-1373.9
NC_009708:2788855:280954528095452809997453Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein3e-1373.9
NC_014029:1760948:176258917625891763041453Yersinia pestis Z176003 chromosome, complete genomehypothetical protein3e-1373.9
NC_017168:3948514:397053539705353970987453Yersinia pestis A1122 chromosome, complete genomehypothetical protein3e-1373.9
NC_017265:2557476:257949725794972579949453Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein3e-1373.9
NC_010465:2820500:283999128399912840443453Yersinia pseudotuberculosis YPIII, complete genometype VI secretion system lysozyme-related protein3e-1373.9
NC_012962:4427000:443157544315754432009435Photorhabdus asymbiotica, complete genomehypothetical protein6e-1062.8
NC_011283:942594:942594942594943019426Klebsiella pneumoniae 342 chromosome, complete genometype VI secretion system lysozyme-like protein1e-0962
NC_009648:3476000:349658834965883497013426Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein1e-0962
NC_008253:2965573:297080029708002971228429Escherichia coli 536, complete genomehypothetical protein2e-0960.8
NC_011742:3057444:306247930624793062907429Escherichia coli S88 chromosome, complete genomehypothetical protein5e-0959.7
NC_007946:3125577:313061231306123131040429Escherichia coli UTI89, complete genomehypothetical protein5e-0959.7
NC_009255:2044291:206250020625002062931432Burkholderia vietnamiensis G4 chromosome 2, complete sequenceGPW/gp25 family protein7e-0855.8
NC_009255:1250939:125408812540881254519432Burkholderia vietnamiensis G4 chromosome 2, complete sequenceGPW/gp25 family protein1e-0755.5
NC_016590:1183470:120992912099291210387459Burkholderia sp. YI23 chromosome 3, complete sequencehypothetical protein2e-0754.7