Pre_GI: BLASTP Hits

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Query: NC_010067:2488141:2501066 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 2501066, End: 2501911, Length: 846

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_007952:495000:513099513099513941843Burkholderia xenovorans LB400 chromosome 2, complete sequencehypothetical protein3e-59228
NC_014323:3195178:319761631976163198476861Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein1e-56220
NC_007953:572926:594489594489595337849Burkholderia xenovorans LB400 chromosome 3, complete sequencehypothetical protein2e-55216
NC_008313:2629281:264064026406402641500861Ralstonia eutropha H16 chromosome 1, complete sequencehypothetical protein8e-55214
NC_016043:1603499:160467916046791605524846Taylorella asinigenitalis MCE3 chromosome, complete genomehypothetical protein1e-41170
NC_017904:1763015:178117517811751782044870Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein1e-37156
NC_015259:485015:556989556989557807819Polymorphum gilvum SL003B-26A1 chromosome, complete genomeHypothetical cytosolic protein2e-36152
NC_016831:2108557:211955821195582119821264Salmonella enterica subsp. enterica serovar Gallinarum/pullorumhypothetical protein1e-35150
NC_010102:2178594:218959821895982189861264Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein8e-36150
NC_011094:973140:981590981590981853264Salmonella enterica subsp. enterica serovar Schwarzengrund strMaoC like domain-containing protein9e-35147
NC_006905:946418:954866954866955078213Salmonella enterica subsp. enterica serovar Choleraesuis strhypothetical protein4e-1685.5
NC_016863:920346:928800928800928997198Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein2e-1583.2
NC_016860:959609:968063968063968260198Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein2e-1583.2
NC_012125:894955:903409903409903606198Salmonella enterica subsp. enterica serovar Paratyphi C strainhypothetical protein2e-1583.2
NC_011205:944125:952585952585952782198Salmonella enterica subsp. enterica serovar Dublin str. CT_020218532e-1583.2
NC_011083:967260:975715975715975912198Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,2e-1583.2
NC_011080:924326:932781932781932978198Salmonella enterica subsp. enterica serovar Newport str. SL254,2e-1583.2