Pre_GI: BLASTP Hits

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Query: NC_010067:1116148:1116741 Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete

Start: 1116741, End: 1117472, Length: 732

Host Lineage: Salmonella enterica; Salmonella; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This subspecies (IIIa) is usually found associated with reptiles, although contact with infected animals can result in the spread of the organism to humans or animals such as turkeys. This strain was originally isolated from a cornsnake in 1986 in Oregon, USA. Causes enteric infections. This group of Enterobactericiae have pathogenic characteristics and are one of the most common causes of enteric infections (food poisoning) worldwide. They were named after the scientist Dr. Daniel Salmon who isolated the first organism, Salmonella choleraesuis, from the intestine of a pig. The presence of several pathogenicity islands (PAIs) that encode various virulence factors allows Salmonella spp. to colonize and infect host organisms. There are two important PAIs, Salmonella pathogenicity island 1 and 2 (SPI-1 and SPI-2) that encode two different type III secretion systems for the delivery of effector molecules into the host cell that result in internalization of the bacteria which then leads to systemic spread.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011745:1055354:107828710782871078994708Escherichia coli ED1a chromosome, complete genomehydrogenase 1 b-type cytochrome subunit1e-114412
NC_016856:1621279:162127916212791622022744Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative Ni/Fe hydrogenase 1 b-type cytochrome subunit2e-67255
NC_003197:1611302:161130216113021612045744Salmonella typhimurium LT2, complete genomeputative Ni/Fe hydrogenase 1 b-type cytochrome subunit2e-67255
NC_003198:1463253:148298414829841483712729Salmonella enterica subsp. enterica serovar Typhi str. CT18,Ni/Fe-hydrogenase 1 b-type cytochrome subunit HyaC22e-67255
NC_015761:1488807:148880714888071489535729Salmonella bongori NCTC 12419, complete genomeNi/Fe-hydrogenase 1 b-type cytochrome subunit HyaC22e-67255
NC_010067:1414000:143137214313721432100729Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein3e-67254
NC_009720:2424975:243662124366212437373753Xanthobacter autotrophicus Py2, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit5e-54211
NC_013851:2610847:262691226269122627610699Allochromatium vinosum DSM 180 chromosome, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit2e-49195
NC_004463:1872537:189177418917741892508735Bradyrhizobium japonicum USDA 110, complete genomeHupC protein homolog3e-36151
NC_017249:8358438:836198283619828362674693Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein3e-36151
NC_011060:1947795:194910719491071949790684Pelodictyon phaeoclathratiforme BU-1, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit4e-30131
NC_018515:3411276:341443934144393415137699Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit8e-30130
NC_011059:921690:938527938527939216690Prosthecochloris aestuarii DSM 271, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit2e-28125
NC_020411:28995:466544665447349696Hydrogenobaculum sp. HO, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit1e-27123
NC_015557:30622:466204662047315696Hydrogenobaculum sp. 3684 chromosome, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit1e-27123
NC_015587:28997:466564665647351696Hydrogenobaculum sp. SHO chromosome, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit1e-27123
NC_009921:4035225:403694340369434037629687Frankia sp. EAN1pec, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit1e-1480.5
NC_012483:3529895:353655035365503537344795Acidobacterium capsulatum ATCC 51196, complete genomenickel-iron hydrogenase, b-type cytochrome subunit1e-1480.5
NC_007575:1484305:150028115002811501012732Sulfurimonas denitrificans DSM 1251, complete genomenickel-dependent hydrogenase b-type cytochrome subunit7e-1374.3
NC_015499:352934:363157363157363738582Thermodesulfobium narugense DSM 14796 chromosome, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit3e-1168.9
NC_009092:1989977:201501620150162015687672Shewanella loihica PV-4, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit4e-1065.5
NC_014541:1165991:119702411970241197692669Ferrimonas balearica DSM 9799 chromosome, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit5e-1065.1
NC_011206:2040000:205946320594632060218756Acidithiobacillus ferrooxidans ATCC 53993, complete genomecytochrome B5612e-0859.7
NC_017192:1933106:194179019417901942494705Arcobacter sp. L, complete genomeNi/Fe hydrogenase cytochrome b subunit9e-0857.4
NC_011761:2131911:217142121714212172176756Acidithiobacillus ferrooxidans ATCC 23270 chromosome, complete[Ni/Fe] hydrogenase, b-type cytochrome subunit5e-0755.1
NC_018515:937994:954045954045954635591Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeNi/Fe-hydrogenase, b-type cytochrome subunit5e-0754.7