Pre_GI: BLASTP Hits

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Query: NC_009802:1570215:1590015 Campylobacter concisus 13826, complete genome

Start: 1590015, End: 1591184, Length: 1170

Host Lineage: Campylobacter concisus; Campylobacter; Campylobacteraceae; Campylobacterales; Proteobacteria; Bacteria

General Information: Campylobacter concisus 13826 is a gastrointestinal clinical isolate. Members of this genus are one of the most common causes of bacterial gastroenteritis (campylobacteriosis). Usually the symptoms are abdominal pain, fever, diarrhea, and cramps, but the illness can sometimes be fatal and some infected individuals develop a syndrome (Guillain-Barre) in which the nerves connecting the spinal cord to the brain are damaged. C. jejuni is the main cause of campylobacteriosis, but other species can also cause infection, including C. coli, C. upsaliensis, and C. concisus. Campylobacter concisus was first isolated from the human oral cavity in cases of gingivitis; however the role it plays in periodontal disease is unclear. This organism has also been isolated from children and immunocompromised patients with gastrointestinal disease. C. concisus is a genetically diverse species, comprised of at least four genomospecies.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009802:931129:9433169433169444581143Campylobacter concisus 13826, complete genomebacterial type II and III secretion system protein2e-1997.1
NC_008609:2933468:2944165294416529453251161Pelobacter propionicus DSM 2379, complete genometype II and III secretion system protein7e-1168.6
NC_014931:5594946:5599821559982156012091389Variovorax paradoxus EPS chromosome, complete genometype II and III secretion system protein4e-0859.7
NC_012791:4680500:4685562468556246869351374Variovorax paradoxus S110 chromosome 1, complete genometype II and III secretion system protein4e-0859.3
NC_020209:47504:4750447504496362133Pseudomonas poae RE*1-1-14, complete genomeputative type III secretion protein5e-0859.3
NC_014207:500373:5108415108415133572517Methylotenera sp. 301 chromosome, complete genometype II and III secretion system protein1e-0757.8
NC_007484:266594:2760422760422781412100Nitrosococcus oceani ATCC 19707, complete genomeFimbrial assembly protein pilQ precursor2e-0757
NC_014311:1309562:1309562130956213118412280Ralstonia solanacearum PSI07 chromosome, complete genometype II secretory pathway, gspd-related protein3e-0756.6
NC_014315:352395:3643903643903664892100Nitrosococcus watsoni C-113 chromosome, complete genometype IV pilus secretin PilQ3e-0756.6
NC_011661:1049767:1051499105149910557644266Dictyoglomus turgidum DSM 6724, complete genometype II and III secretion system protein4e-0756.2
NC_015677:1282865:1298431129843113004372007Ramlibacter tataouinensis TTB310 chromosome, complete genomesecretin, general secretion pathway protein D4e-0756.2
NC_003296:556836:5876855876855897812097Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePUTATIVE GENERAL SECRETION PATHWAY GSPD-RELATED PROTEIN4e-0756.2
NC_010465:733916:7458167458167470871272Yersinia pseudotuberculosis YPIII, complete genometype II and III secretion system protein8e-0755.5
NC_004463:3857763:3871115387111538727671653Bradyrhizobium japonicum USDA 110, complete genomehypothetical protein8e-0755.5
NC_009708:692508:7054477054477067661320Yersinia pseudotuberculosis IP 31758 chromosome, complete genometype II/III secretion system protein1e-0655.1
NC_006155:3992818:4005940400594040072591320Yersinia pseudotuberculosis IP 32953, complete genomeputative outer membrane secretin family protein9e-0755.1
NC_010634:3905369:3917401391740139187201320Yersinia pseudotuberculosis PB1/+, complete genometype II and III secretion system protein9e-0755.1
NC_014762:1204584:1231801123180112334081608Sulfuricurvum kujiense DSM 16994 chromosome, complete genometype ii and iii secretion system protein8e-0755.1
NC_014733:1073540:1073540107354010755552016Methylovorus sp. MP688 chromosome, complete genometype II and iii secretion system protein1e-0654.7
NC_008358:2638245:2655587265558726576712085Hyphomonas neptunium ATCC 15444, complete genometype II secretion system protein1e-0654.7
NC_004605:1385444:1411351141135114128141464Vibrio parahaemolyticus RIMD 2210633 chromosome II, completeputative type III secretion system EscC protein2e-0653.9
NC_016616:1233555:1243206124320612453802175Dechlorosoma suillum PS chromosome, complete genometype IV pilus secretin PilQ/competence protein3e-0653.5
NC_013722:2784000:2805567280556728074861920Xanthomonas albilineans, complete genomeprobable type iv pilus assembly protein pilq3e-0653.5
NC_015563:1172745:1181591118159111837382148Delftia sp. Cs1-4 chromosome, complete genometype IV pilus secretin PilQ2e-0653.5
NC_002940:1065246:1068170106817010695401371Haemophilus ducreyi 35000HP, complete genomerough colony protein A2e-0653.5
NC_015224:3820338:3841986384198638432181233Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome,putative tight adherance operon protein4e-0653.1
NC_015581:1133775:1154293115429311563772085Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomegeneral secretion pathway protein D4e-0652.8
NC_010172:31264:3232532325347092385Methylobacterium extorquens PA1, complete genomegeneral secretion pathway protein D5e-0652.8
NC_012988:32996:3299632996353802385Methylobacterium extorquens DM4, complete genomeGeneral secretion pathway protein D6e-0652.4
NC_008563:3362058:3386561338656133886212061Escherichia coli APEC O1, complete genomeputative type II secretion protein GspD6e-0652.4
NC_010501:908000:9380999380999393581260Pseudomonas putida W619, complete genometype II and III secretion system protein6e-0652.4
NC_007946:3289151:3313654331365433157142061Escherichia coli UTI89, complete genomehypothetical type II secretion protein GspD6e-0652.4
NC_011742:3277941:3301353330135333034132061Escherichia coli S88 chromosome, complete genomegeneral secretion pathway protein D6e-0652.4
NC_020829:1840281:1846988184698818490332046Pseudomonas denitrificans ATCC 13867, complete genometype II secretion system protein5e-0652.4
NC_005126:4423964:4444107444410744459511845Photorhabdus luminescens subsp. laumondii TTO1, complete genomeType III secretion component protein SctC8e-0652
NC_011745:3511600:3534163353416335362232061Escherichia coli ED1a chromosome, complete genomegeneral secretion pathway protein D8e-0652
NC_011751:3530954:3559790355979035618502061Escherichia coli UMN026 chromosome, complete genomegeneral secretion pathway protein D8e-0652
NC_010498:3291344:3318117331811733201772061Escherichia coli SMS-3-5, complete genomegeneral secretion pathway protein GspD8e-0652
NC_008800:3955284:3963583396358339649441362Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative tight adherance operon protein8e-0652
NC_008786:18688:2762027620297582139Verminephrobacter eiseniae EF01-2, complete genometype IV pilus secretin PilQ7e-0652
NC_015711:8909256:8916587891658789192982712Myxococcus fulvus HW-1 chromosome, complete genometype IV pilus secretin PilQ7e-0652
NC_012967:3012317:3036934303693430389942061Escherichia coli B str. REL606 chromosome, complete genometype II secretion protein GspD9e-0651.6
NC_008253:3161311:3204785320478532068452061Escherichia coli 536, complete genomehypothetical type II secretion protein GspD9e-0651.6
NC_011750:3584000:3607684360768436097442061Escherichia coli IAI39 chromosome, complete genomegeneral secretion pathway protein D9e-0651.6
NC_008786:738791:7583807583807605422163Verminephrobacter eiseniae EF01-2, complete genomegeneral secretion pathway protein D9e-0651.6