Pre_GI: BLASTP Hits

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Query: NC_009727:670616:669687 Coxiella burnetii Dugway 7E9-12, complete genome

Start: 669687, End: 670631, Length: 945

Host Lineage: Coxiella burnetii; Coxiella; Coxiellaceae; Legionellales; Proteobacteria; Bacteria

General Information: Coxiella burnetii Dugway 5J108-111 was isolated from rodents in Utah, USA. This organism is widely distributed in nature and can cause infections in reptiles, birds, and mammals. It causes Q fever, or 'query' fever, an atypical pneumonia first associated with abattoir workers in Australia. Transmission may be through insect vectors such as ticks that have bitten an infected wild or domesticated animal, or through an aerosol produced by domesticated animals such as sheep or cattle. The presence of a plasmid is believed to be associated with virulence and pathogenicity, however C. burnetii isolates containing plasmid QpDG are avirulent in guinea pigs and plasmidless isolates have been associated with endocarditis in humans. Coxiella burnetii has a developmental life cycle, and can grow vegetatively through binary fission, or asymmetrically and produce a spore-like cell. The spore-like cell may enable the organism to exist extracellularly for small amounts of time. This bacterium is an obligate intracellular pathogen. It is endocytosed by a host cell, a macrophage for example, and lives and replicates inside the phagolysozome, a unique property of this organism. The genome encodes proteins that have a higher than average pI, which may enable adaptation to the acidic environment of the phagolysozome. The chromosome also contains genes for a number of detoxification and stress response proteins such as dismutases that allow growth in the oxidative environment. The type IV system is similar to the one found in Legionella, which may be important for intracellular survival. This organism produces numerous ankyrin-repeat proteins that may be involved in interactions with the host cell. The genome has 83 pseudogenes, which may be a result of the typical genome-wide degradation observed with other intracellular organisms and also has a group I intron in the 23S ribosomal RNA gene.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011527:1255998:128907812890781290022945Coxiella burnetii CbuG_Q212, complete genomeNADH-dependent dehydrogenase0653
NC_002971:619355:620938620938621882945Coxiella burnetii RSA 493, complete genomeoxidoreductase, Gfo/Idh/MocA family0651
NC_010117:700112:701695701695702639945Coxiella burnetii RSA 331, complete genomeoxidoreductase, NAD-binding0651
NC_020304:2677372:2718359271835927194081050Desulfocapsa sulfexigens DSM 10523, complete genomeputative dehydrogenase4e-1272.4
NC_005945:3359598:3362071336207133631021032Bacillus anthracis str. Sterne, complete genomeoxidoreductase, Gfo/Idh/MocA family5e-1168.6
NC_007908:1328832:1339211133921113402601050Rhodoferax ferrireducens T118, complete genomeoxidoreductase-like3e-1066.2
NC_016628:1190366:1190366119036611914061041Vibrio furnissii NCTC 11218 chromosome 2, complete sequenceputative dehydrogenase5e-0962
NC_008817:709370:7209897209897220921104Prochlorococcus marinus str. MIT 9515, complete genomeputative oxidoreductase7e-0961.6
NC_010729:1179008:1188515118851511895251011Porphyromonas gingivalis ATCC 33277, complete genomehypothetical protein2e-0860.5
NC_015320:470988:487417487417488322906Archaeoglobus veneficus SNP6 chromosome, complete genomeoxidoreductase domain-containing protein3e-0859.7
NC_007103:291000:2975012975012985261026Bacillus cereus E33L plasmid pE33L466, complete sequencepossible myo-inositol 2-dehydrogenase4e-0859.3
NC_010803:2067539:209293120929312093929999Chlorobium limicola DSM 245, complete genomeoxidoreductase domain protein7e-0858.2
NC_011653:1339868:1351863135186313529451083Thermosipho africanus TCF52B, complete genomelipopolysaccharide biosynthesis protein BplA1e-0757.4
NC_014622:653599:6685976685976696731077Paenibacillus polymyxa SC2 chromosome, complete genomeoxidoreductase domain-containing protein2e-0757
NC_003413:748906:758735758735759685951Pyrococcus furiosus DSM 3638, complete genomeputative dehydrogenase2e-0756.6
NC_015703:5391478:5411452541145254124681017Runella slithyformis DSM 19594 chromosome, complete genomeoxidoreductase domain-containing protein3e-0756.2
NC_006177:2883476:2887545288754528886301086Symbiobacterium thermophilum IAM 14863, complete genomeputative oxidoreductase4e-0755.8
NC_012803:1094679:1107565110756511086951131Micrococcus luteus NCTC 2665, complete genomepredicted dehydrogenase5e-0755.5
NC_012881:4055962:4069916406991640709231008Desulfovibrio salexigens DSM 2638, complete genomeoxidoreductase domain protein5e-0755.5
NC_009328:1903291:192804819280481929037990Geobacillus thermodenitrificans NG80-2 chromosome, complete genomeoxidoreductase6e-0755.1
NC_016641:2225779:2241058224105822421341077Paenibacillus terrae HPL-003 chromosome, complete genomeoxidoreductase domain-containing protein8e-0754.7
NC_015709:1459838:1505104150510415061771074Zymomonas mobilis subsp. pomaceae ATCC 29192 chromosome, completeoxidoreductase domain-containing protein1e-0653.9
NC_012804:2017531:203739720373972038347951Thermococcus gammatolerans EJ3, complete genomeOxidoreductase, substrate unknown1e-0653.9
NC_015177:2559903:256047125604712561454984Pedobacter saltans DSM 12145 chromosome, complete genomeoxidoreductase domain protein2e-0653.5
NC_021066:1712905:1717114171711417181961083Raoultella ornithinolytica B6, complete genomeoxidoreductase domain-containing protein3e-0652.8
NC_015520:224136:2383092383092393611053Mahella australiensis 50-1 BON chromosome, complete genomeoxidoreductase domain-containing protein4e-0652.4
NC_014758:310394:312634312634313602969Calditerrivibrio nitroreducens DSM 19672 chromosome, completeoxidoreductase domain protein9e-0651.2