Pre_GI: BLASTP Hits

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Query: NC_009708:3542336:3564024 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 3564024, End: 3565367, Length: 1344

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009381:3228500:3249420324942032508021383Yersinia pestis Pestoides F chromosome, complete genomeNa(+)-translocating NADH-quinone reductase subunit A0880
NC_008150:3015000:3036834303683430382161383Yersinia pestis Antiqua, complete genomeNADH-ubiquinone oxidoreductase subunit A0880
NC_017160:3560153:3581841358184135831841344Yersinia pestis D182038 chromosome, complete genomeNa(+)-translocating NADH-quinone reductase subunit A0880
NC_017154:3576256:3597944359794435992871344Yersinia pestis D106004 chromosome, complete genomeNa(+)-translocating NADH-quinone reductase subunit A0880
NC_010159:3502350:3524066352406635254091344Yersinia pestis Angola, complete genomeNADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit0878
NC_010465:3597000:3617881361788136192421362Yersinia pseudotuberculosis YPIII, complete genomeNADH:ubiquinone oxidoreductase, subunit A0878
NC_014029:3633955:3655643365564336568721230Yersinia pestis Z176003 chromosome, complete genomeNa translocating NADH:ubiquinone oxidoreductase subunit A0804
NC_015276:2852010:2860540286054028618771338Marinomonas mediterranea MMB-1 chromosome, complete genomeNa(+)-translocating NADH-quinone reductase subunit A1e-147523
NC_004459:1794540:1816194181619418174801287Vibrio vulnificus CMCP6 chromosome I, complete sequenceNa(+)-translocating NADH-quinone reductase subunit A3e-146518
NC_010506:4404377:4411607441160744130251419Shewanella woodyi ATCC 51908, complete genomeNADH:ubiquinone oxidoreductase, subunit A1e-145516
NC_012881:334250:3494983494983508381341Desulfovibrio salexigens DSM 2638, complete genomeNADH:ubiquinone oxidoreductase, subunit A3e-127455
NC_013939:1927424:1939739193973919410581320Deferribacter desulfuricans SSM1, complete genomeNa(+)-translocating NADH-quinone reductase subunit A2e-68260
NC_015571:1265121:1281851128185112832061356Porphyromonas gingivalis TDC60, complete genomeNa(+)-translocating NADH-quinone reductase, subunit A1e-62241