Pre_GI: BLASTP Hits

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Query: NC_009708:2245586:2250301 Yersinia pseudotuberculosis IP 31758 chromosome, complete genome

Start: 2250301, End: 2250546, Length: 246

Host Lineage: Yersinia pseudotuberculosis; Yersinia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: This strain is serotype 1b and was isolated in 1966 from the stools of a patient presenting with scarlet-like fever in the Primorski region of the former USSR. Environmental bacterium that causes gastrointestinal disease. Specific virulence factors are encoded within pathogenicity islands (PAIs) that are required for the invasive phenotype associated with Yersinia infections. One key virulence plasmid contained by the three human-specific pathogens is pCD1/pYv, which encodes a type III secretion system for the delivery of virulence proteins that contribute to internalization into the host cell. This organism was first isolated in 1883 by Malassez and Vignal and is termed pseudotuberculosis since it causes lesions in the lung that are similar to those observed during tuberculosis infection. It is ubiquitous in the environment and is a food and waterborne pathogen that affects animals as well as humans by causing gastroenteritis like Yersinia enterocolitica.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:1765399:178349317834931783747255Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein4e-43173
NC_017168:3290380:329379932937993294044246Yersinia pestis A1122 chromosome, complete genomehypothetical protein6e-43172
NC_009381:1064227:106826810682681068513246Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein6e-43172
NC_010465:2282874:228758922875892287834246Yersinia pseudotuberculosis YPIII, complete genomehypothetical protein6e-43172
NC_008149:1842500:187698018769801877225246Yersinia pestis Nepal516, complete genomehypothetical protein6e-43172
NC_008150:1705152:174031917403191740564246Yersinia pestis Antiqua, complete genomehypothetical protein6e-43172
NC_014844:1818939:184441618444161844694279Desulfovibrio aespoeensis Aspo-2 chromosome, complete genomehypothetical protein3e-1683.6
NC_011146:2200142:223926722392672239587321Geobacter bemidjiensis Bem, complete genomehypothetical protein1e-1582
NC_009720:670853:682928682928683164237Xanthobacter autotrophicus Py2, complete genome2e-1374.7
NC_014314:1148000:115171911517191152138420Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completehypothetical protein2e-0857.8
NC_010338:3743000:379125637912563791561306Caulobacter sp. K31, complete genomehypothetical protein9e-0752.4
NC_014375:217612:237992237992238288297Brevundimonas subvibrioides ATCC 15264 chromosome, complete genomehypothetical protein2e-0651.2
NC_015565:1075693:107771910777191078009291Desulfotomaculum carboxydivorans CO-1-SRB chromosome, completehypothetical protein2e-0650.8