Pre_GI: BLASTP Hits

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Query: NC_009664:4347718:4359524 Kineococcus radiotolerans SRS30216, complete genome

Start: 4359524, End: 4360177, Length: 654

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017093:5225864:523639552363955237063669Actinoplanes missouriensis 431, complete genomeputative TetR-family transcriptional regulator3e-1892
NC_012704:696374:705911705911706603693Corynebacterium kroppenstedtii DSM 44385, complete genometranscriptional regulator, TetR family1e-1686.7
NC_009921:1813500:184397718439771844687711Frankia sp. EAN1pec, complete genometranscriptional regulator, TetR family2e-1685.9
NC_006361:4597718:462450046245004625183684Nocardia farcinica IFM 10152, complete genomeputative transcriptional regulator8e-1580.5
NC_014666:1117000:113313811331381133842705Frankia sp. EuI1c chromosome, complete genomeregulatory protein TetR1e-1273.2
NC_014307:1131241:114012811401281140727600Ralstonia solanacearum CFBP2957 chromosome, complete genomeTetR family transcriptional regulator1e-1169.7
NC_014310:1750817:175724317572431757839597Ralstonia solanacearum PSI07 megaplasmid, complete sequenceTetR family transcriptional regulator2e-1168.9
NC_008699:2294361:233821723382172338930714Nocardioides sp. JS614, complete genomeregulatory protein, TetR2e-1168.9
NC_015951:107360:117786117786118340555Streptomyces violaceusniger Tu 4113 plasmid pSTRVI01, completeregulatory protein TetR7e-1167.4
NC_015434:2683631:269688526968852697439555Verrucosispora maris AB-18-032 chromosome, complete genomeTetR family transcriptional regulator2e-1065.9
NC_011365:1596652:161991016199101620509600Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeTetR family transcriptional regulator3e-1065.5
NC_009664:4423829:442487344248734425499627Kineococcus radiotolerans SRS30216, complete genometranscriptional regulator, TetR family5e-1064.7
NC_013521:2193203:219552721955272196075549Sanguibacter keddieii DSM 10542, complete genometranscriptional regulator, tetR family5e-1064.3
NC_014323:3976351:400574140057414006313573Herbaspirillum seropedicae SmR1 chromosome, complete genometranscription regulator protein1e-0962.8
NC_012489:3503632:350485135048513505480630Gemmatimonas aurantiaca T-27, complete genomeTetR family transcriptional regulator2e-0962.4
NC_003155:622993:653742653742654326585Streptomyces avermitilis MA-4680, complete genomeTetR-family transcriptional regulator2e-0858.9
NC_016582:7699420:770664677066467707239594Streptomyces bingchenggensis BCW-1 chromosome, complete genomeTetR family transcriptional regulator4e-0858.2
NC_013929:5850599:586993558699355870588654Streptomyces scabiei 87.22 chromosome, complete genometranscriptional regulator5e-0857.8
NC_014666:2629799:264302426430242643593570Frankia sp. EuI1c chromosome, complete genomeregulatory protein TetR2e-0755.8
NC_010688:3515885:352608335260833526709627Xanthomonas campestris pv. campestris, complete genometranscriptional regulator, TetR family2e-0652.8
NC_003902:1416000:142181514218151422441627Xanthomonas campestris pv. campestris str. ATCC 33913, completetranscriptional regulator2e-0652.8
NC_016114:7282882:730012873001287300718591Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeregulatory protein TetR2e-0652.8
NC_015656:2900730:291491029149102915503594Frankia symbiont of Datisca glomerata chromosome, complete genomeregulatory protein TetR3e-0652
NC_015434:1173794:119680711968071197418612Verrucosispora maris AB-18-032 chromosome, complete genomeTetR family transcriptional regulator3e-0652
NC_015957:7348269:735711373571137357745633Streptomyces violaceusniger Tu 4113 chromosome, complete genomeregulatory protein TetR4e-0651.6
NC_013947:6221877:622643162264316226991561Stackebrandtia nassauensis DSM 44728 chromosome, complete genometranscriptional regulator, TetR family7e-0650.8