Pre_GI: BLASTP Hits

Some Help

Query: NC_009664:4225325:4243055 Kineococcus radiotolerans SRS30216, complete genome

Start: 4243055, End: 4244293, Length: 1239

Host Lineage: Kineococcus radiotolerans; Kineococcus; Kineosporiaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: This organism is a coccoid bacterium originally isolated from a high-level radioactive waste cell at the Savannah River Site in Aiken, South Carolina, USA, in 2002. Radiation-resistant bacterium. Similarly to Deinococcus radiodurans, K. radiotolerans exhibits a high degree of resistance to ionizing gamma-radiation. Cells are also highly resistant to dessication. Kineococcus-like 16S rRNA gene sequences have been reported from the Mojave desert and other arid environments where these bacteria seem to be ubiquitous. Because of its high resistance to ionizing radiation and desiccation, K. radiotolerans has potential use in applications involving in situ biodegradation of problematic organic contaminants from highly radioactive environments. Moreover, comparative functional genomic characterization of this species and other known radiotolerant bacteria such as Deinococcus radiodurans and Rubrobacter xylanophilus will shed light onto the strategies these bacteria use for survival in high radiation environments, as well as the evolutionary origins of radioresistance and their highly efficient DNA repair machinery. This organism produces an orange carotenoid-like pigment. Cell growth occurs between 11-41 degresss C, pH 5-9, and in the presence of <5% NaCl and <20% glucose. Carbohydrates and alcohols are primary growth substrates.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016109:8256000:8277435827743582786641230Kitasatospora setae KM-6054, complete genomehypothetical protein1e-72274
CP002185:3393813:3394490339449033956501161Escherichia coli W, complete genomeglutathionylspermidine synthase2e-58226
NC_009801:3511444:3511444351144435126041161Escherichia coli E24377A, complete genomeglutathionylspermidine synthase family protein2e-58226
NC_000913:3176000:3178443317844331796031161Escherichia coli K12, complete genomepredicted enzyme2e-58226
CP002516:693703:7104257104257115851161Escherichia coli KO11, complete genomeTrypanothione synthase2e-58226
NC_013353:3787991:3791131379113137922911161Escherichia coli O103:H2 str. 12009, complete genomeenzyme3e-58226
AP010958:3787991:3791131379113137922911161Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted enzyme3e-58226
NC_011741:3263248:3263248326324832644081161Escherichia coli IAI1 chromosome, complete genomehypothetical protein3e-58226
CU928160:3263248:3263248326324832644081161Escherichia coli IAI1 chromosome, complete genomeputative enzyme3e-58226
NC_011748:3529930:3530511353051135316711161Escherichia coli 55989, complete genomeputative enzyme3e-58226
CU928145:3529930:3530511353051135316711161Escherichia coli 55989 chromosome, complete genomeputative enzyme3e-58226
NC_010468:694943:7129897129897141491161Escherichia coli ATCC 8739, complete genomeglutathionylspermidine synthase2e-58226
NC_010473:3273882:3276188327618832773481161Escherichia coli str. K-12 substr. DH10B, complete genomepredicted enzyme2e-58226
NC_011750:3683760:3686066368606636872261161Escherichia coli IAI39 chromosome, complete genomehypothetical protein2e-58226
NC_016612:627118:6294106294106305701161Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative glutathione-like synthetase2e-58226
NC_016902:693703:7104257104257115851161Escherichia coli KO11FL chromosome, complete genomeTrypanothione synthase2e-58226
NC_013364:3840000:3842388384238838435481161Escherichia coli O111:H- str. 11128, complete genomeputative enzyme2e-58226
NC_013361:4102894:4103571410357141047311161Escherichia coli O26:H11 str. 11368 chromosome, complete genomehypothetical protein2e-58226
NC_012967:3113768:3114593311459331157531161Escherichia coli B str. REL606 chromosome, complete genomehypothetical protein2e-58226
NC_012947:708064:7247867247867259461161Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completetrypanothione synthase2e-58226
NC_012759:3063285:3065591306559130667511161Escherichia coli BW2952 chromosome, complete genomeputative enzyme2e-58226
NC_011745:3627438:3627438362743836285981161Escherichia coli ED1a chromosome, complete genomehypothetical protein2e-58226
NC_011415:3443851:3444528344452834456881161Escherichia coli SE11 chromosome, complete genomeputative glutathionylspermidine synthase2e-58226
NC_009800:3224575:3225252322525232264121161Escherichia coli HS, complete genomeglutathionylspermidine synthase family protein2e-58226
NC_014541:2510819:2521935252193525231011167Ferrimonas balearica DSM 9799 chromosome, complete genomeTrypanothione synthase4e-58225
NC_016822:3485631:3487937348793734890971161Shigella sonnei 53G, complete genomesynthetase/amidase3e-57222
NC_004603:1115134:1115706111570611168721167Vibrio parahaemolyticus RIMD 2210633 chromosome I, completehypothetical protein3e-56219
NC_013456:2528284:2543073254307325442391167Vibrio sp. Ex25 chromosome 1, complete genomeglutathionylspermidine synthase7e-55214
NC_014958:2614399:2621186262118626223521167Deinococcus maricopensis DSM 21211 chromosome, complete genomeglutathionylspermidine synthase8e-35148
NC_006677:579975:5811925811925823911200Gluconobacter oxydans 621H, complete genomehypothetical protein1e-29131
NC_009715:167513:1731691731691743471179Campylobacter curvus 525.92 chromosome, complete genomeglutathionylspermidine synthase family protein2e-23110
NC_018868:2458122:2479120247912024810121893Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomebifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase2e-20100
NC_009648:3720000:3740395374039537422601866Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomebifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase1e-1688.2
NC_013716:3708415:3728168372816837300271860Citrobacter rodentium ICC168, complete genomebifunctional glutathionylspermidine synthetase/amidase [includes glutathionylspermidine synthase; glutathionylspermidine amidase]4e-1686.3
NC_002655:3919545:3944330394433039461891860Escherichia coli O157:H7 EDL933, complete genomeglutathionylspermidine synthetase/amidase5e-1685.9
NC_002695:3852233:3877017387701738788761860Escherichia coli O157:H7 str. Sakai, complete genomeglutathionylspermidine synthetase/amidase5e-1685.9
NC_011353:3956630:3980099398009939819581860Escherichia coli O157:H7 str. EC4115 chromosome, complete genomebifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase5e-1685.9
NC_013008:3911356:3936140393614039379991860Escherichia coli O157:H7 str. TW14359 chromosome, complete genomebifunctional glutathionylspermidine amidase/glutathionylspermidine synthetase5e-1685.9
NC_012779:2856051:2884064288406428859381875Edwardsiella ictaluri 93-146, complete genomebifunctional glutathionylspermidine synthetase/amidase7e-1685.5
NC_011740:2986514:2997489299748929993481860Escherichia fergusonii ATCC 35469, complete genomefused glutathionylspermidine amidase ; glutathionylspermidine synthetase1e-1481.6
NC_011777:100631:1164631164631177041242Bacillus cereus AH820 plasmid pAH820_272, complete sequenceglutathionylspermidine synthetase3e-1479.7
NC_006300:600516:6243646243646262531890Mannheimia succiniciproducens MBEL55E, complete genomeGsp protein3e-1170.1